Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02877 ATGAGTGCGGTGTTTGAAGGTTACGAGCGTCAATACTGTGAGCTGTCTTCAAATCTGTCAAGACAATGCAGTGCAGCCTCTTCTCTTGATGGAGAGCAGAAGAAGCAGAAAATTTCTGAAATAAAAGCTGGAATGGATGATGGTGATACATTGATTCGAAAAATGGAGCTTGAAGCTAGGAGTTTGCAAGCAAGCATGAAGGCATCTCTTCTTGTCAAGTTAAAGGAATACAAAACCGATTTGAACAACTTGAAAAGTGAGCTTAAAAGAATCACATCGGCTGCTAATAATAATAAAGATGAGTTGTTGGAATTGGGACAGGCTGATACATTGGCGGTGTCATCAAACGATCACAGAGGAAGACTGGTGATGTCTACAGAGAGATTGAATCAGTCGTCTGAAAGAATAAAGGAGAGCAGGAGAAGCATGCTGGAAACAGAGGAGCTTGGCGCCGCCATCCTCCAAGATTTGCATCAACAACGCCAGTCACTACTTCATGCCCACAACACGCTTCATGGAGTGGATGATAACATCGACAAAAGCAAGAAGATTTTGACAGCTATCTCAAGAAGGATGAGTAGGAATAAATGGATTCTTGGCTCCTTCATGGCGGCCATAGTCCTTGCAATTATAGTTATCTTAACCATTAAAGTCTCTCGTTAG 663 0.4223 MSAVFEGYERQYCELSSNLSRQCSAASSLDGEQKKQKISEIKAGMDDGDTLIRKMELEARSLQASMKASLLVKLKEYKTDLNNLKSELKRITSAANNNKDELLELGQADTLAVSSNDHRGRLVMSTERLNQSSERIKESRRSMLETEELGAAILQDLHQQRQSLLHAHNTLHGVDDNIDKSKKILTAISRRMSRNKWILGSFMAAIVLAIIVILTIKVSR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02877 220 PANTHER VESICLE TRANSPORT V-SNARE 13-LIKE 1 219 - -
Adu08g02877 220 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 219 - -
Adu08g02877 220 CDD SNARE_Vti1 126 186 - -
Adu08g02877 220 PIRSF Membrin-2 1 218 IPR027027 GO:0005484|GO:0005794|GO:0016192
Adu08g02877 220 Pfam Vesicle transport v-SNARE protein N-terminus 12 90 IPR007705 GO:0006886|GO:0016020
Adu08g02877 220 Coils Coil 67 101 - -
Adu08g02877 220 SUPERFAMILY SNARE fusion complex 129 187 - -
Adu08g02877 220 Pfam Snare region anchored in the vesicle membrane C-terminus 127 192 - -
Adu08g02877 220 SUPERFAMILY t-snare proteins 6 93 IPR010989 GO:0016020|GO:0016192
Adu08g02877 220 Gene3D - 1 99 IPR038407 -
Adu08g02877 220 Gene3D - 116 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02877 Adu-Chr8 45259303 45260245 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02877 K08493 - gmx:100801744 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02877 08 45259303 45260245 Adu08g02877 08 45259303 45260245 ECH