Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02817 ATGGCTGCTACAATGGAAGATAGTCCAAGAAGTCCAGAGGCAAAGCTTGGAATGAGAGTAGAAGATCTTTGGGATGTTCAAGAACCACAACTAAGTCCTAATGAGAAGCTCAATGCTTGTTTTGAAAGCATACCTGTCTCTGCTTTCCCTCCACCTCCTTCAAACCAAGAAATTGAGATAAAATCAGATGCTACCTTAGCTGAGGCAGTTGAAATACTAGCAGAACACAACATCCTGAGTGCACCTGTGGTGGATGTTGATGCACCTGAAGATGCCAGCTGGATTGACAGATACATAGGGATAGTTGAGTTTGCAGGAATTGTTGTGTGGATTCTTCATCAGTCTGATCCTACATCTCCTAAGAGTCCATCAAGTAGATCCAATGGAACAGCAATTGAAGCTGCAACTAATGGCATGGCTTCTCTACAACTTGAGGGCAAGGACCTTGGATCTTCTACAACAACTTCAGGGAACTTCTTTGAGGATCTCACTTCTTCTGAACTTTATAAGAATACCAAGGTTAGAGATATCTCAGGATCATTTCGGTGGGCCCCATTTCTTGCACTGGAGAGGTCAAACTCATTCTTGACCATGCTATTGCTACTCTCAAAGTACAAGATGAAGAGTATTCCTGTGGTGGACTTAGGTGCTGGAAGAATTGATCAAATCATTACTCAATCTGCTGTGATACACATGTTGGGTGAATGTGCTGGTCTTCAATGGTTTGAGAGCTGGGGAACCAAGAAAATATCTGAAGTTGGTCTTCCTCTAGTCACACCAAATCATATCATCAAGGTATATGAGGATGAACCAGTGCTTCAAGCCTTTAGATTGATGAGAAAAAAGAGGATTGGAGGTGTGCCTGTAGTGGAAAGGGGTGGCAACAATCCAGTGGGTAATATAAGCCTCCATGATGTTCAGTTCTTGCTAACTGCCCCAGAAATATACCATGATTATAGAGCAATTACTGCCAAGGATTTCCTAACAGCTGTTAAAAGCTACTTGAAGAAGCATGAAAAGGTTGTTCCTATGTCAAGGGGTTTGATTACTTGCAAAAAGGATTGTACAATAAAAGAGTTGATCCAATTGCTAGATCATGAAAAGATTCACAGGGTCTATGTTGTGGATGATGATGGAAATCTTGAGGGACTCGTCACTCTAAGAGACATAATCTCAAGGCTTGTACATGAGCCACGTGGCTACTTTGGTGATTTCTTTGATGGCGTTCTTCCCATGCCTCCAAATAGTAGGGTTTAA 1257 0.42 MAATMEDSPRSPEAKLGMRVEDLWDVQEPQLSPNEKLNACFESIPVSAFPPPPSNQEIEIKSDATLAEAVEILAEHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSDPTSPKSPSSRSNGTAIEAATNGMASLQLEGKDLGSSTTTSGNFFEDLTSSELYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSIPVVDLGAGRIDQIITQSAVIHMLGECAGLQWFESWGTKKISEVGLPLVTPNHIIKVYEDEPVLQAFRLMRKKRIGGVPVVERGGNNPVGNISLHDVQFLLTAPEIYHDYRAITAKDFLTAVKSYLKKHEKVVPMSRGLITCKKDCTIKELIQLLDHEKIHRVYVVDDDGNLEGLVTLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02817 418 SMART cbs_1 262 311 IPR000644 -
Adu08g02817 418 SMART cbs_1 347 395 IPR000644 -
Adu08g02817 418 SMART cbs_1 56 112 IPR000644 -
Adu08g02817 418 SMART cbs_1 185 234 IPR000644 -
Adu08g02817 418 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED 6 418 - -
Adu08g02817 418 SUPERFAMILY CBS-domain pair 30 233 IPR046342 -
Adu08g02817 418 Gene3D - 247 397 IPR046342 -
Adu08g02817 418 SUPERFAMILY CBS-domain pair 246 404 IPR046342 -
Adu08g02817 418 CDD CBS_pair_SF 60 119 - -
Adu08g02817 418 CDD CBS_pair_SF 199 306 - -
Adu08g02817 418 ProSiteProfiles CBS domain profile. 53 118 IPR000644 -
Adu08g02817 418 Gene3D - 36 240 IPR046342 -
Adu08g02817 418 ProSiteProfiles CBS domain profile. 344 402 IPR000644 -
Adu08g02817 418 CDD CBS_pair_SF 262 391 - -
Adu08g02817 418 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 6 418 - -
Adu08g02817 418 ProSiteProfiles CBS domain profile. 258 319 IPR000644 -
Adu08g02817 418 Pfam CBS domain 344 395 IPR000644 -
Adu08g02817 418 Pfam CBS domain 58 103 IPR000644 -
Adu08g02817 418 Pfam CBS domain 263 306 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02817 Adu-Chr8 44753210 44755950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02817 - - gmx:100776754 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02817 08 44753210 44755950 Adu08g02817 08 44753210 44755950 ECH
Adu01g01690 01 57165091 57168370 Adu08g02817 08 44753210 44755950 PCT