Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02808 ATGGCGGCAGCCACTTCCAGAACCCCATTCTCCACCGTATCTCCATCTTCTTCCACTTCCTCTTCTCACTCCACCTTCCCAAACCGTGTTCTCAGATCCACGCTCCCATTTTCCTCCATTCTCACCAATAATAAGAAGCACCATTCCCTCAAAATATCAAACACCATCTCAAACAACCCTAAACCACGACCACCATCCGCTACCACCACCATCACCACCACCACACCAACCACCGCACCCTCCATCGCCACTCGTCCTCCCGCCGGCGAGCCTCGCAAGGGCGCAGATATCCTCGTGGAGGCTCTGGAGCGTGAAGGCGTCTGCATCGCCACCTCCGGTCCCGGCGCCACCAACCTCGTGTCCGGCCTCGCCGACGCGATGATGGACTCAATCCCTATCGTCGCCGTGACCGGCCAGGTTCCCCGCCGCATGATCGGAACCGACGCATTTCAAGAAACCCCAATCGTTGAGGTAACTCGATCTATCACGAAGCATAATTACCTTGTTCTTGATGTTGATGAAATCCCTAGGATTGTTAGAGAGGCATTTTTTGTAGCTACTACTGGTAGACCTGGACCTGTTTTGATTGATGTTCCTAAAGATGTTCAGCAACAATTGGCAGTTCCCAATTGGGATTTGCCTGTTAGGGTTGCTGGTTATGTTTCTAGGATGCCAAAGATTCCAAGTTTGGCGGAATTAGAGAGCGTTGTGAGGCTAGTTTCGGAGGCGAAGAAACCGGTTTTGTATGTTGGTGGTGGTTGTTTGAATTGTAGTGAGGAATTGAGAAGGTTTGTGGAGATTACGGGTATTCCGGTAGCGAGTACTTTGATGGGCCTTGGTGTTTACCCTGTTGGTGGTGATGATTCTCTTCAGATGTTGGGGATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAAGAGTGATTTGTTGCTTGCATTTGGGGTTAGGTTTGATGATCGTGTAACCGGGAAGCTTGAGGCTTTCGCGAGTAGGGCGAAGATTGTGCACATTGATATTGATTCTGCTGAGATTGGGAAGAACAAGATCCCACACGTGTCGATTTGCGCAGATGTGAAAGTGGCATTGGAAGGGATCAATGGGATCTTGGAGGAAAAGGGGGTCAATAAAAAGAATCTTGGTCTTGAGGATTGGAGGGAAGAGCTGAGTGTGCAGAAGCAGAAGTTCCCATTGAGTTATAAGACTTTTGGTGATCTGATTTCGCCGCAGCATGCAATTCAGGTTCTTGATGAGCTCACAAATGGGGATGCAATCATTAGTACCGGTGTAGGTCAGCATCAGATGTGGGCGGCACAGTTTTACAAGTACAAGAGGCCGAGGCAGTGGTTGACATCAGGGGGTCTTGGCGCTATGGGTTTCGGCTTGCCTGCTGCAATTGGCGCAGCTGTGGCTAACCCTGGAACCGTCGTTGTTGACATCGATGGGGATGGTAGCTTCATCATGAATGTGCAAGAGTTGGCAACCATAAAGGTGGAGAATCTACCGGTTAAGATTCTGTTGTTGAATAATCAGCACTTGGGTATGGTTGTTCAGTGGGAAGACAGGTTCTACAAGTCCAATAGAGCTCACACATACCTCGGCAACCCTACGAATGAGGCTGAGATTTTTCCAAACATGTTGAAGTTCGCCGAGGGTTGTGGAATACCAGCAGCACGTGTGACGAAGAAGGAAGATCTTAGAGCCGCAATCAAGAAGATGCTGGACACGCCCGGCCCTTACCTTCTTGATGTGATTGTGCCTCATCAAGAGCATGTCTTGCCAATGATCCCAAGTAATGGATCCTTCAATGATGTGATTACTGAGGGTGATGGAAGAACTAAATACTAA 1848 0.4897 MAAATSRTPFSTVSPSSSTSSSHSTFPNRVLRSTLPFSSILTNNKKHHSLKISNTISNNPKPRPPSATTTITTTTPTTAPSIATRPPAGEPRKGADILVEALEREGVCIATSGPGATNLVSGLADAMMDSIPIVAVTGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDEIPRIVREAFFVATTGRPGPVLIDVPKDVQQQLAVPNWDLPVRVAGYVSRMPKIPSLAELESVVRLVSEAKKPVLYVGGGCLNCSEELRRFVEITGIPVASTLMGLGVYPVGGDDSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKVALEGINGILEEKGVNKKNLGLEDWREELSVQKQKFPLSYKTFGDLISPQHAIQVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPGTVVVDIDGDGSFIMNVQELATIKVENLPVKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGNPTNEAEIFPNMLKFAEGCGIPAARVTKKEDLRAAIKKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFNDVITEGDGRTKY 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02808 615 Pfam Thiamine pyrophosphate enzyme, central domain 234 364 IPR012000 GO:0000287|GO:0030976
Adu08g02808 615 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 91 217 IPR029061 -
Adu08g02808 615 SUPERFAMILY DHS-like NAD/FAD-binding domain 230 397 IPR029035 -
Adu08g02808 615 Gene3D - 399 585 - -
Adu08g02808 615 CDD TPP_PYR_POX_like 106 200 - -
Adu08g02808 615 ProSitePatterns Thiamine pyrophosphate enzymes signature. 466 485 IPR000399 GO:0000287|GO:0030976
Adu08g02808 615 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 96 607 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Adu08g02808 615 PANTHER ACETOLACTATE SYNTHASE 61 107 - -
Adu08g02808 615 PANTHER ACETOLACTATE SYNTHASE 106 614 - -
Adu08g02808 615 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 103 205 IPR012001 GO:0030976
Adu08g02808 615 Gene3D - 233 398 - -
Adu08g02808 615 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 429 584 IPR011766 GO:0003824|GO:0030976
Adu08g02808 615 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 106 614 IPR045229 -
Adu08g02808 615 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 61 107 IPR045229 -
Adu08g02808 615 CDD TPP_AHAS 407 598 IPR039368 GO:0030976
Adu08g02808 615 MobiDBLite consensus disorder prediction 52 92 - -
Adu08g02808 615 MobiDBLite consensus disorder prediction 1 27 - -
Adu08g02808 615 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 407 607 IPR029061 -
Adu08g02808 615 Gene3D - 88 224 - -
Adu08g02808 615 MobiDBLite consensus disorder prediction 52 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02808 Adu-Chr8 44657400 44659582 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02808 K01652 - gmx:100798203 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02808 08 44657400 44659582 Adu08g02808 08 44657400 44659582 ECH