Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02797 ATGGCAAGTCAAAGTGGTGCGTCTCGAAGGAGCATAACGTCTGTTAGAAAATCCATTGATCATGGAGCTTCTCAATCTAATGCTCGAAAGTCTCTTTCTTCTTCGCGTCCCTTGGGACTGACGGCAGAGCGGACAGTAAAATCATTGCGTCTTTCAAAGGCTCTAACAGTACCTGAAACAACAACCATCTATGAAGCTTGTCGTCGCATGGCTGCTCGCAGATTAGATGCTATATTACTCACTGATTCAAATGCTTTGCTCTGTGGAATCCTTACAGACAAGGACATAGCAAAAAGAGCTATTGCCTCAGAGCTTAGTCTTGAAGACACACCTGTTTCTAAGATTATGACAAAGAATCCAGTATTTGTCCTTTCTGAAACTCTTGCAGTGGAAGCCCTCCAAAAGATGGTGCAAGGCAAATTCAGACATTTACCTGTGGTGGACAATGGAGAAGTTGTTGCCATACTTGATATAGCAAAGTGCTTGTATGATGCTATCGCTCGTATGGAACGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAGGGTGTTGAAAAACAATGGGGATCATCTACTGCGGTCAATTCAACATTCATTGAGACTATTCGGGAACAGATATTCAAGCCATCATTGTCTACGATCATTCCTGAGAATTTAAAGGTTGTAACAGTTTCACCAACAGATTCTGTTTTGACAACTACGAAGAAGATGGTTGAACTTCATTCAAGTTCTGCTGTTGTGACAGTTGATGGCAAACCTCGCGGCATCCTTACTTCCAAGGATATATTGATGCGGGTAGTTGCGCAAAATCTTCCTCCAGTTTCAACTCCTGTTGACAAGGTGATGACTCCTAATCCAGAATGTGCAGTTATTGATACACCAATAGTAGATGCACTTCACACTATGCATGATGGAAAATTTTTGCATCTTCCTGTGGTTGATAGAGATGGTGGGGTAGTTGCGGTGGTTGATGTGATTCATGTCACACATGCTGCTGTTGCAACAGCAAGTCAGGTTGGAAACAATGAAGCTGCCAGCACCATGATGCAAAGATTCTGGGATTCGGCCATGGCCTTAACTCAAAATGATGATGATGACGAAACACGAAGTGACAGTTCCTTGAAATTTGCTTCAGAAGGAATGCATAGATTCACATGTGATACACGGAGCATGACAGAGGTTATAACTTCAATCCTTCAGAGACTTGGTGATGATATTGACCCCAATAATCTACCCCAAATTTTGTATGAAGACGAAGATCATGATAAAGTGATATTGGCTTCAGACAGTGATCTTGCAGCAGCTGTAGACCATGCAAGGACAACTGGCATGAAGGGATTGAGATTGTACTTAGACTACTCTGGAACCGGAACCGGAACCGGAACAGGAACAGGAAAACGCAGTCATGGGAGAGGTTCTGGTTCAGGGAGTTTGGATCATGCTACTAAAGATGCATGGGCCTCAGCATACAGTACCTATGCCGCTGGAGCTGCACTTGTTGCAGGCTTAGGCATATTAACATACTTGAAGCGACTCCGAAATTTTGTATTACTGAGAACCATTTATAGCGTCATCAGCCCTGCATAG 1593 0.4344 MASQSGASRRSITSVRKSIDHGASQSNARKSLSSSRPLGLTAERTVKSLRLSKALTVPETTTIYEACRRMAARRLDAILLTDSNALLCGILTDKDIAKRAIASELSLEDTPVSKIMTKNPVFVLSETLAVEALQKMVQGKFRHLPVVDNGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKQWGSSTAVNSTFIETIREQIFKPSLSTIIPENLKVVTVSPTDSVLTTTKKMVELHSSSAVVTVDGKPRGILTSKDILMRVVAQNLPPVSTPVDKVMTPNPECAVIDTPIVDALHTMHDGKFLHLPVVDRDGGVVAVVDVIHVTHAAVATASQVGNNEAASTMMQRFWDSAMALTQNDDDDETRSDSSLKFASEGMHRFTCDTRSMTEVITSILQRLGDDIDPNNLPQILYEDEDHDKVILASDSDLAAAVDHARTTGMKGLRLYLDYSGTGTGTGTGTGKRSHGRGSGSGSLDHATKDAWASAYSTYAAGAALVAGLGILTYLKRLRNFVLLRTIYSVISPA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02797 530 CDD CBS_pair_MUG70_1 51 167 - -
Adu08g02797 530 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 22 382 - -
Adu08g02797 530 Gene3D - 197 348 IPR046342 -
Adu08g02797 530 Gene3D - 20 181 IPR046342 -
Adu08g02797 530 ProSiteProfiles CBS domain profile. 284 341 IPR000644 -
Adu08g02797 530 SMART PB1_new 371 456 IPR000270 GO:0005515
Adu08g02797 530 SUPERFAMILY CAD & PB1 domains 375 458 - -
Adu08g02797 530 MobiDBLite consensus disorder prediction 1 37 - -
Adu08g02797 530 Pfam CBS domain 52 98 IPR000644 -
Adu08g02797 530 Pfam CBS domain 222 267 IPR000644 -
Adu08g02797 530 Pfam CBS domain 281 330 IPR000644 -
Adu08g02797 530 Pfam CBS domain 112 156 IPR000644 -
Adu08g02797 530 Pfam PB1 domain 376 454 IPR000270 GO:0005515
Adu08g02797 530 ProSiteProfiles PB1 domain profile. 358 456 IPR000270 GO:0005515
Adu08g02797 530 SUPERFAMILY CBS-domain pair 45 159 IPR046342 -
Adu08g02797 530 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 383 501 - -
Adu08g02797 530 ProSiteProfiles CBS domain profile. 116 174 IPR000644 -
Adu08g02797 530 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 22 382 - -
Adu08g02797 530 SUPERFAMILY CBS-domain pair 222 334 IPR046342 -
Adu08g02797 530 ProSiteProfiles CBS domain profile. 216 276 IPR000644 -
Adu08g02797 530 ProSiteProfiles CBS domain profile. 50 107 IPR000644 -
Adu08g02797 530 SMART cbs_1 287 332 IPR000644 -
Adu08g02797 530 SMART cbs_1 222 269 IPR000644 -
Adu08g02797 530 SMART cbs_1 53 101 IPR000644 -
Adu08g02797 530 SMART cbs_1 119 163 IPR000644 -
Adu08g02797 530 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 383 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02797 Adu-Chr8 44557711 44562970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02797 - - gmx:100785816 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02797 08 44557711 44562970 Adu08g02797 08 44557711 44562970 ECH
Adu08g02797 08 44557711 44562970 Adu03g02840 03 107118619 107122830 PCT