Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02628 ATGTCTAAATTGAAATCTTCTTCATCATCTTCAATGTTACTTCCACTTCTTATATCTTTTCTTCTCCTCATTGTTCCAACATTCTCAACATCAAGAAAAGTTCTTGATGAGAATCACCATGAAGGGATCATCAGAGTCAACCTTCGCCATGTTGACTCCGGCAAGAACCTAACCAAGCTGGAGCGTGTCCAACATGGCATGAAGCGCGCCAAGAGCCGCCTCCAGTGGCTCAACGCAATGGTAACAAAAAAACAATCCCAATTCTCTAAAAGCGAAGAACTAGATTCAGATTCAGAATCTTCTGAATCTGAATCTAGTTCTTCGCAAATCCAGTCTCCAATACACGTGGGGAACGGGGAGTACCTAATGGAACTAGCCATAGGTACTCCTCCAAAGTCGTATCCCGCGATATTGGACACTGGTAGCGACCTCATATGGACACAATGCCAGCCTTGTTCCCAATGTTACAAGCAACCAACACCTATCTTCGACCCCAAGAAATCTTCGAGTTTCTCGAAGCTTTCTTGCGGAAGCAATCTATGCAACGTTCTACCTTCCTCCAGCTGTAGCAGCGGCGGTGGCGGCGACAGCGACGGCTGCCAGTATATGTACTCATACGGAGATTATTCCGTCACACAAGGCGTTTTAGCAACCGAGACTTTCACTTTTGGCAGTTCTAAGATTAAAAGCATTGGATTTGGATGCGGCGAAGATAATCAAGGAAGTGGATTCGAACAAGCTTCCGGTTTAGTCGGACTAGGCCGGGGGCCATTATCGCTTGTTTCGCAGCTCAAAGAGCCGAAATTTTCGTATTGCTTACAATCCATTGATGACAGAAAAAACAGTGTTCTTTTGTTAGGATCATTACCGAAAACGAAAAACGCGAAAGGAGCTGTAACGACACCGTTGCTTAAGAATCCGATGCAGCCTTCGTTTTACTTCCTTGATCTGCAAGGAATCTCGGTTGGTGGAACTCAATTGAGCATTGAGGAATCGACGTTTGAACTCGGCGATAACGGAAGTGGTGGCATGATCATTGATTCAGGGACAACAATTACATACATTGAAGAAAATGCTTTTGATGCATTGAAGAAGGAGTTTGTTTCACAAATGGATTTGCCAGTGGATAATTCTGGATCAACAGGGCTTGATGTATGCTTCAGTTTGGAGTCTGCTTCGGGTCGAATCGAGCAGAATTTGTTGGTGAATCATGATCTTCAGAAGGAGACTATTACTTTTGTTCCTACACAGTGTGATCAGGTTTAA 1266 0.4415 MSKLKSSSSSSMLLPLLISFLLLIVPTFSTSRKVLDENHHEGIIRVNLRHVDSGKNLTKLERVQHGMKRAKSRLQWLNAMVTKKQSQFSKSEELDSDSESSESESSSSQIQSPIHVGNGEYLMELAIGTPPKSYPAILDTGSDLIWTQCQPCSQCYKQPTPIFDPKKSSSFSKLSCGSNLCNVLPSSSCSSGGGGDSDGCQYMYSYGDYSVTQGVLATETFTFGSSKIKSIGFGCGEDNQGSGFEQASGLVGLGRGPLSLVSQLKEPKFSYCLQSIDDRKNSVLLLGSLPKTKNAKGAVTTPLLKNPMQPSFYFLDLQGISVGGTQLSIEESTFELGDNGSGGMIIDSGTTITYIEENAFDALKKEFVSQMDLPVDNSGSTGLDVCFSLESASGRIEQNLLVNHDLQKETITFVPTQCDQV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02628 421 Pfam Xylanase inhibitor N-terminal 121 288 IPR032861 -
Adu08g02628 421 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 344 355 IPR001969 GO:0004190|GO:0006508
Adu08g02628 421 PANTHER OS08G0469000 PROTEIN 17 393 - -
Adu08g02628 421 MobiDBLite consensus disorder prediction 87 112 - -
Adu08g02628 421 CDD pepsin_A_like_plant 120 418 IPR034161 -
Adu08g02628 421 ProSiteProfiles Peptidase family A1 domain profile. 121 421 IPR033121 -
Adu08g02628 421 Gene3D Acid Proteases 94 287 IPR021109 -
Adu08g02628 421 PRINTS Pepsin (A1) aspartic protease family signature 344 355 IPR001461 GO:0004190|GO:0006508
Adu08g02628 421 PRINTS Pepsin (A1) aspartic protease family signature 127 147 IPR001461 GO:0004190|GO:0006508
Adu08g02628 421 Pfam Xylanase inhibitor C-terminal 313 392 IPR032799 -
Adu08g02628 421 SUPERFAMILY Acid proteases 113 419 IPR021109 -
Adu08g02628 421 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 136 147 IPR001969 GO:0004190|GO:0006508
Adu08g02628 421 Gene3D Acid Proteases 288 397 IPR021109 -
Adu08g02628 421 PANTHER OS07G0603500 PROTEIN-RELATED 17 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02628 Adu-Chr8 42410400 42411795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02628 119 265 Miscellaneous Gene Families AT1G77480 34.177 1.09e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02628 - - adu:107463277 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02628 08 42410400 42411795 Adu08g02628 08 42410400 42411795 ECH
Adu03g02991 03 112789142 112791414 Adu08g02628 08 42410400 42411795 ECH