Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02618 ATGCATGATGGGAAGTTCTTACATCTTCCAGTGGTGGACAAAGACGGCAACATTGCTGCTTGTTTGGATGTTTTGCAAATAACAACTGCTGCAATTTCTCTGGTTGAAAGTAGCTCTGGAACTGTAAATGATGTGGCAAACTCAATTATGCAAAAATTTTGGGACTCAGCTTTAGCGCTAGAGCCACCAGATGATTATGACACTCAGAGTGAAGTTTCCGGGATAATGAATTCAGATGGAGCAGATACTGCAAAGTCTACATACCAATCTGTAGGTCATGGAAATTCATTTACTTTTAAATTTGAGGATCCTAATGGTCGAGTGCATCGAGTCACCTGTGGAGCGGAAAATCTAGATGAGCTTGTATCTGCTATCATGGAAAGGGTCAGTAATAATGACAGATCACGCCCCGTAATTTTGTATGATGATGATGAAGGTGATAAAATTGTTATTGCAAACGATAGTGATCTCGTTTCTGCTGTCAGCTATGCTCGATCTGCAGGACTGAAGGCCTTGAAGTTGGATTTGGAGTTTACAGATTCAGCTAAACCCGTGACACCACAGTCTGCAATAGCCATGACCACAACCACAGCTACGAGACGGAAAACAGAAGGCGGCATGTTGTCCATTCGCTCGAGTATTTTGGCAGGTGCTGTTGTTCTAACGAGCATTGGCGTGGTGGCTTACTTGAAGCGCTCAAATCAGTGA 708 0.4322 MHDGKFLHLPVVDKDGNIAACLDVLQITTAAISLVESSSGTVNDVANSIMQKFWDSALALEPPDDYDTQSEVSGIMNSDGADTAKSTYQSVGHGNSFTFKFEDPNGRVHRVTCGAENLDELVSAIMERVSNNDRSRPVILYDDDEGDKIVIANDSDLVSAVSYARSAGLKALKLDLEFTDSAKPVTPQSAIAMTTTTATRRKTEGGMLSIRSSILAGAVVLTSIGVVAYLKRSNQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02618 235 Pfam PB1 domain 97 175 IPR000270 GO:0005515
Adu08g02618 235 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 222 - -
Adu08g02618 235 SUPERFAMILY CAD & PB1 domains 85 178 - -
Adu08g02618 235 SMART PB1_new 96 179 IPR000270 GO:0005515
Adu08g02618 235 MobiDBLite consensus disorder prediction 70 87 - -
Adu08g02618 235 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 1 222 - -
Adu08g02618 235 ProSiteProfiles PB1 domain profile. 94 179 IPR000270 GO:0005515
Adu08g02618 235 MobiDBLite consensus disorder prediction 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02618 Adu-Chr8 42277045 42278837 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02618 - - aip:110262389 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02618 08 42277045 42278837 Adu08g02618 08 42277045 42278837 ECH
Adu03g02840 03 107118619 107122830 Adu08g02618 08 42277045 42278837 PCT