Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02555 ATGATGCAGAGACGGAGTCCTCCGAAACATAGGCACGATGGGACTTCGCCGCTGCCACTCGGCATGGATTGGAGTCCCGCTCCTCGAAAATGGAATGGGCGAGATACAGTATGGCCACACAATCATCGTACTGGTTGGAGTTACTGTGTCACAATACCTTCTTGGGTTTTCATTCCGAAATCAAAGAATTCAGATCCTATAGTGGTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCACCACCCAAGGGACTCATGCGATTGAAAAGCCGGGCTTTGTTGGAAGAGAGAAAGTCCTCATTGGAGGAGTGGATCACCAAACTTTTGTCTGACATTGATATATCAAGGTGCGCTGCGGTGGCATCATTTCTTGAACTAGAAGCTGCTGCTAGATCCTCTTTCCAAGATGCAAGCCAGCAGAGCTCTGAATCAGATCCTGATTCCAATAACAGAGCTTATTCAGTTCAATCACCTCCCCATTCAAGCCTATCATTTGCTGCTGGAAGTTCATCTATTGCCTCTGATTATGGTAGTGATACGGCATATGAGCCATCTGAACTAGGAACTCCAAGAATTGGACGGGATGACAATTCTGAAGGCGGCACAGATGATCTAACAGTAGATGAAGAGATCACAAATCCAATGGAAAAGCTTATGAAATACGGTATATCAAATATTGATGAGGGTTTGTTCATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGTAAATGCCAGACATGTCAATTATGTTACAGAGAAGGAAAAGAATAATGGTAATTCTTATAATGCTTCACATTTAGCTAATAATTCTATGGAGCTTTTCTCTGAGACTGAGCATGCTACTGTTATCAATCACACTCGCAAGCTTTCATCTGAGAGTATTGGGAGTGATGGTAGCTCAATACGAGGTAGTGATATGTCTAATTCTGGAATTCGAAATTCATCTGGTGATGGTTCTCATGACGTTCCTGGAGGTGCTATGGTTTCAAGACCAACAGATATTATGGGCCGTGCACAATCACAGTCTTCTGGTGATGGTCAAATAGTCCTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTTAACCATGCAGCGAAGGCTAGTCAGTGCAAAAACTGATATGGAGGACCTTATAGTCAGATTAAATCAAGAGATAGCTGCAAAGGATTTCCTCACAACGAAGGTCAAGGATTTGGAAGTAGAACTTGAAACCACCAAACAGAAAAGTAAGGAGAACTTGCAGCAGGCTATTCTGATTGAGAGGGAAAGGTTTACGCAAATGCAGTGGGATATGGAGGAACTCCGGCGGAAGTCACTCGAAATGGAGATGAAACTGAAGTCCGAATCGGGTGGAAATTCAAGTGAGAATTTATCAAAGGATGCAGTTGTTCAGCAGAAAGATGTACTGTTGCAGAATTTAAATGCTGCTAAAGAGCAGCTGGAAATTTTGTCAAAACAGTATGGGGAGCTAGAAGTAAAATCAAAAGCAGATGTTAAGATTCTGGTTAAAGAGGTCAAATCTCTACGGAATACCCAAAAGGAGTTGAAGAAGGAGCTTAGTGAGTCAGTAAAGGAAAAGTGTGAAACTGAGAAACTTATTCAACAAGAAAGAGAGAGGAGGGAGCAGACAGAAACTGCTTGGCGAGAGCTGCTGCAAAAATCCCGGCTTCTTTTCAACCAGCTTCAAGAGTGCGATGTCAATCTTCCTAGCGAAGATGAAGATAGGGCAACAATGAAGAGTTCATCATCAAGTGAGACTTTTAATCAGTTAGCAGCATCTGATGGCCAAATTGACTTCCTAATACGAGAGGTAGAAAACTTAGGGAAGGACTACGGAAGTGGTGCTTCTAGTGTAGATAAAACCAATAAAATTAAAGATGGTATACTCTGTGATGATGAAGTGAGAAAGATCATTGCAGATTTGTTCATGGACAATGTTAGATTGAGAAAACAGACAAACCGCATTACAAGGCAAGCTTTCAAATTGGACATGAAAGAAAATGATGCTTCTCCTACGGAAAATGTAACAAGTATTTAG 2064 0.4176 MMQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHNHRTGWSYCVTIPSWVFIPKSKNSDPIVVKKEFPRKNIPPAPPKGLMRLKSRALLEERKSSLEEWITKLLSDIDISRCAAVASFLELEAAARSSFQDASQQSSESDPDSNNRAYSVQSPPHSSLSFAAGSSSIASDYGSDTAYEPSELGTPRIGRDDNSEGGTDDLTVDEEITNPMEKLMKYGISNIDEGLFMGQTILEQLEGLPRHKVNARHVNYVTEKEKNNGNSYNASHLANNSMELFSETEHATVINHTRKLSSESIGSDGSSIRGSDMSNSGIRNSSGDGSHDVPGGAMVSRPTDIMGRAQSQSSGDGQIVLPLDQRNKLNRILLTMQRRLVSAKTDMEDLIVRLNQEIAAKDFLTTKVKDLEVELETTKQKSKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSESGGNSSENLSKDAVVQQKDVLLQNLNAAKEQLEILSKQYGELEVKSKADVKILVKEVKSLRNTQKELKKELSESVKEKCETEKLIQQERERREQTETAWRELLQKSRLLFNQLQECDVNLPSEDEDRATMKSSSSSETFNQLAASDGQIDFLIREVENLGKDYGSGASSVDKTNKIKDGILCDDEVRKIIADLFMDNVRLRKQTNRITRQAFKLDMKENDASPTENVTSI 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02555 687 Coils Coil 507 534 - -
Adu08g02555 687 MobiDBLite consensus disorder prediction 136 179 - -
Adu08g02555 687 MobiDBLite consensus disorder prediction 1 25 - -
Adu08g02555 687 Gene3D - 68 153 IPR036871 GO:0035091
Adu08g02555 687 Pfam PX domain 70 126 IPR001683 GO:0035091
Adu08g02555 687 SUPERFAMILY PX domain 42 128 IPR036871 GO:0035091
Adu08g02555 687 Coils Coil 397 424 - -
Adu08g02555 687 Coils Coil 468 502 - -
Adu08g02555 687 ProSiteProfiles PX domain profile. 1 132 IPR001683 GO:0035091
Adu08g02555 687 MobiDBLite consensus disorder prediction 295 338 - -
Adu08g02555 687 MobiDBLite consensus disorder prediction 295 323 - -
Adu08g02555 687 Coils Coil 542 562 - -
Adu08g02555 687 MobiDBLite consensus disorder prediction 136 210 - -
Adu08g02555 687 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 2 68 - -
Adu08g02555 687 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 69 680 - -
Adu08g02555 687 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 2 68 IPR044588 GO:0015031
Adu08g02555 687 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 69 680 IPR044588 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02555 Adu-Chr8 41597859 41604963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02555 - - gmx:100792151 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02555 08 41597859 41604963 Adu08g02555 08 41597859 41604963 ECH