Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02529 ATGTCTCAAGTCTTTGGCTTTTCAGGTGGTGACGATTTTTGCACTGGGGGGTCAGTATATGCGAACCCAAAGGATGCTAACATCTTCTTGTCGCTCGGTCGATCAGTTGACTTTTACTACCCTCTTCCTAAGAGGTCTCGCATCAGCGTTTCATTTGATCTCGATGGAGATTGGTTTGAGCAGAAGCAGAAGACATCTATTGAAGCCCTGCCAGATGAGTGCCTCTTTGAGATCCTTAGGAGGTTGCCTGCTGGCCAAGCTAGGAGCGCTTGCGCTAACGTGTCAAAGCGCTGGCTTATGCTTCTAAGCAGCATCTCCAATAGTGAGATTTACAGCAACGCAAATGAAAAGGAGCTTAGTGACAAGGAGGGTGATGATCTGGAATTCGGAGATGAGGGATTCCTCTCCCGGAGCTTGGAAGGAAAGAAGGCTACTGATGTTAGACTCGCTGCCATCGCTGTGGGGACATCACATCGCGGTGGATTGGGTAAACTTTCAATCCGTGGAAGCAACTCAGATCGTGGGGTTACTAATCTTGGTCTCAAGGCAGTTGCTCGTGGATGCCCTTCTCTGAAGGCTTTCTCTCTGTGGAACGTTTCTACTGTTAGTGATGAAGGCTTGATCGAGGTTGCTGAGGGGTGTCAAAAGTTAGAGAAGCTTAACCTTTGCAAGTGCTCCGCAATTTCCGACAAGGCTTTAATTGAAGTCGCAAAGAAGTGCCCAAATCTGACCGAGTTGTCTATTGAGTCTTGCCCTCAAATTGGCAATGAAGGTCTACAGGCTGTGGGAAAGTTGTGTGCCAATCTAAGGTCGATCTCAATCAAGGATTGCACCGGAGTCGGTGATCAGGGAATAGCTGGCCTGCTAACTTCTGCTTCCGTTGTTCTGAGAAAGGTGAAGCTCGAGTCGCTGGCGGCTGTATCTGATCTCTCTCTGGCAGTTATTGGGCACTATGGATTTTCGGTCACAGATCTTGTCCTCAATTGCCTTCCAAATGTTAATGAGAAGGGTTTCTGGGTTATGGCCAATGGTCGTGCGCTGCAGAAACTTGCGTCCCTCACAATCGGATCCTGCCGAGGTATAACAGATGCTGCTATTGTAGCTATTGGAAAGGGTTGTCCAAATGTGAGGAACTTCCATCTCAGCAAGTGTGCATTTCTGTCGGACAATGGGTTGGTATCATTAACCAAGGCAGCTCCATCGATCGAGAGCCTACAATTGGAAGAGTGCCACAGGTTTACCCAATTTGGGTTTTTTGGTATCCTTTTTAACTGTGGTGCAAAATTGAAGGCTCTTAATGTCGTTAGCTGCTATGGAATTAAGGATCTGAATCTGGCACTGCCAGCTGGATCTCCTTGCTCCCTTACCTCACTATCAATCTCTGACTGTCCTGGATTTGGAAATGCTAATCTTGCTGTGCTTGGGAGGCTTTGCCCACGTCTTAAGCATGTCGAATTGAGTGGACTGGCAGGAATAACTGACGCAGGGTTTCTTCCACTGCTTGAGAGCTCTGAGGCTGGTTTGGTTAAAGTTAACCTTAGCGGTTGCCTGAATCTGACTGACATAGTAGTCATCTCCTTGGCCAATTCACATGGCTGGACTCTTGAGGTGCTTAACCTTGATGGCTGCCGAAACATCACTGACGCCAGCTTAAAGGCAATTGCAGTCAATTGCCCCTTGCTCTCTGATCTCGACGTTTCCAAGTGCGCCATCACTGATGCCGGGATTGCTGCCCTTGCCCGTGGCAAACAGCTCAATCTGGAGATCCTTTCTCTGTCATGTTGCTCTTCAGTATCAGAGAAGAGCTTGCCTGCGTTGAGGAAACTTGGCAACAGCCTCATCGGACTGAACATCCGGCACTGCAGCGCAATCAGCAGCCGTGCAGTTGGCATGCTTGTTGAACATCTCTGGAGGTGTGACATCCTCTGTTGA 1932 0.486 MSQVFGFSGGDDFCTGGSVYANPKDANIFLSLGRSVDFYYPLPKRSRISVSFDLDGDWFEQKQKTSIEALPDECLFEILRRLPAGQARSACANVSKRWLMLLSSISNSEIYSNANEKELSDKEGDDLEFGDEGFLSRSLEGKKATDVRLAAIAVGTSHRGGLGKLSIRGSNSDRGVTNLGLKAVARGCPSLKAFSLWNVSTVSDEGLIEVAEGCQKLEKLNLCKCSAISDKALIEVAKKCPNLTELSIESCPQIGNEGLQAVGKLCANLRSISIKDCTGVGDQGIAGLLTSASVVLRKVKLESLAAVSDLSLAVIGHYGFSVTDLVLNCLPNVNEKGFWVMANGRALQKLASLTIGSCRGITDAAIVAIGKGCPNVRNFHLSKCAFLSDNGLVSLTKAAPSIESLQLEECHRFTQFGFFGILFNCGAKLKALNVVSCYGIKDLNLALPAGSPCSLTSLSISDCPGFGNANLAVLGRLCPRLKHVELSGLAGITDAGFLPLLESSEAGLVKVNLSGCLNLTDIVVISLANSHGWTLEVLNLDGCRNITDASLKAIAVNCPLLSDLDVSKCAITDAGIAALARGKQLNLEILSLSCCSSVSEKSLPALRKLGNSLIGLNIRHCSAISSRAVGMLVEHLWRCDILC 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02529 643 PANTHER UNCHARACTERIZED 16 634 - -
Adu08g02529 643 SMART LRR_CC_2 347 372 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 188 213 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 478 503 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 610 635 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 505 530 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 584 609 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 240 265 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 453 477 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 214 239 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 558 582 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 532 557 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 266 291 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 399 424 IPR006553 -
Adu08g02529 643 SMART LRR_CC_2 373 398 IPR006553 -
Adu08g02529 643 SUPERFAMILY RNI-like 180 290 - -
Adu08g02529 643 Gene3D Ribonuclease Inhibitor 505 642 IPR032675 -
Adu08g02529 643 Gene3D Ribonuclease Inhibitor 159 238 IPR032675 -
Adu08g02529 643 Gene3D Ribonuclease Inhibitor 450 504 IPR032675 -
Adu08g02529 643 Gene3D Ribonuclease Inhibitor 239 449 IPR032675 -
Adu08g02529 643 Gene3D - 60 108 - -
Adu08g02529 643 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 16 634 - -
Adu08g02529 643 SMART fbox_2 70 111 IPR001810 GO:0005515
Adu08g02529 643 ProSiteProfiles F-box domain profile. 64 114 IPR001810 GO:0005515
Adu08g02529 643 SUPERFAMILY F-box domain 63 104 IPR036047 GO:0005515
Adu08g02529 643 SUPERFAMILY RNI-like 320 639 - -
Adu08g02529 643 Pfam Leucine Rich repeat 558 580 IPR001611 GO:0005515
Adu08g02529 643 Pfam Leucine Rich repeat 239 262 IPR001611 GO:0005515
Adu08g02529 643 Pfam Leucine Rich repeat 534 555 IPR001611 GO:0005515
Adu08g02529 643 Pfam F-box domain 70 106 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02529 Adu-Chr8 41286667 41290484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02529 K14515 - gmx:100820247 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02529 08 41286667 41290484 Adu08g02529 08 41286667 41290484 ECH
Adu06g02823 06 105484186 105487872 Adu08g02529 08 41286667 41290484 PCT