LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g02523	ATGGATTCTGAAGGAAGTGAAAAGGAGACCGTGGTTACTCAGGTTAGCATTGGTGGATTTGACCGTGAGGTCAGAGCAAATGATCTTGTGGTATTCTTGGAAGAGAAAATTGGAATGGTAGATAGGTGTCGCTTGAAGACCTCTTGGACCCCTCCAGAGTCATATCCAGATTTCAGCATCATTGATACTACACGGGTTAAAAAAACTGATGCCTATCAGAAGGTGGAGCCCCATGCCTTTGTGCATTTCGCAATGTCGGAATATGTAGCCGAGGCTCTTAATGCTGCAGGTCGAGGTGATCTAGTTTTGAATAACTCGCCGTTGAAAGTTAGTTGTGGTCCTGAAAATCCACACTTCTTAAGGCAGAGGAGGAGAAAGACAACTCCTTTTAAGATGTGTGATGTACTTGTTGAAATTGGTACTTTAGTTAAACCTGAGGAATTTGTAGTCGCTTGGAGAGGACCTAACAAAGGGGTAAACTTTCTAGTGGATCCTTTTGATAGCATGTGCAAAGTTTGTTTCAATAAGGACGTTGTATTTGCATTCAAAGGAAAAGAAACAAAAGCAGTCATAAAGTGTGATTTTCAGGTGGGATTCTTGGTGAGAGACATAAATGAGATAAAGCAATATAAGGATATGTCATCTTTTGTTGTTTTATTGCACCTTGCTTCAGCTCCTTGGGTTTGGTATAGAACTGCAGATGATGACATTGTAGAATCTCCAATTGATTTGCTTGATGACGATGATCCGTGGGCTAGGACCACTGATTTTACACCAAGTGGGGCCATTGGTCGATGCAATTTTTATAGAATTTCAATACCACCACGCCACGGTGCAAAATTGGTTAAGGCCATGCATTACTTGAGAGCTCAAAGAGTGCAAGATATTTCACTTAGGCGACCACCTAGGGTACTGGATGAACTAGATTTTGGTGTGTCCATGTCAGATCCTTTCTTCTGCATTCATTCACAGAAAGGTGTTGCTTTTGATGTTATATTCTTGGTTAATGCTGTCTTGCACAAAGGTATAATCAATCAACACAGTTTGTCAGATGAGTTTTTTGAATTGCTGAGAAATCAACCTAAGGAGGTCAATGTGGCTGCGCTGAAACACTTATGTTCATACAAGCGTCCAGTGTTTGATGCAGCTAAGAGGCTGAAACAAGTCCAAGAATGGTTGCTCAGAAATCCAAAACTTTATCAGAACTCGAAACAGTTAGATGATGTTGTTGAGGTTAGAAGACTGGTCATCACTCCAACTAAAGCCTACTGTATACCACCAGAGGTTGAACTGTCCAACAGGGTTCTTAGAAACTACAAAGAACTTTCAGATCGTTTCTTAAGGGTCACCTTTATGGATGAAGGCATGCAAACAATCAATGCGAATGCTCTTAACTATTATGTTGCTCCCATAGTGAAGGAAATCACTTCAAACTCCTTTCCGCAGAAGACACTAATTTATAGGAGGGTGAAGAATATCTTGGAAGAGGGGTTTCATTTATGTGGCCGAAAGTATTCATTTTTGGCTTTCTCTTCCAATCAACTGCGGGATCGTTCTGCTTGGTTTTTTGCTAATGCAAGCAACGAAACTTGTGATACCATAAGAAATTGGATGGGAAAGTTCAAAATACACAATATTGCAAAATGTGCTGCTCGGATGGGACAGTGTTTTTCATCCACTTATGCAACAGTTCAAGTTGCAGATGGTGAGGTTAACTATCGTTTGCCAGATATTGTAAGGAATAACTATGTTTTCTCCGATGGCATCGGTATTATTACTACTGATCTGGCAGGGGAAGTTGCTGAAAAGTTGAAATTGGACAGTGTGCCCTCTGCATATCAGATCAGATTTGCTGGTTTTAAAGGGGTAGTAGCCTCTTGGCCTGCCAAAGGGGATGAGCATCGGCTCTCTTTAAGGCCTAGTATGGACAAGTTTTCTTCTAATCATAAGACCTTGGAGATTTGTGCCTGGACTAGGTTTCAGCCTGGATTTCTGAATAGGCAGATTATAACATTGCTTTCAGCATTGGATGTATCAGATGAAATATTTTGGCAAATGCAGAAGGCAATGATTTCAAGGTTAAATGAAATGCTTGTGGATGCCAATGTGGCATTTGAAGTTCTTACGAAATCCTGTGCTGAGCATGGAAATGCTGCAGCAATAATGTTAAGTTGTGGCTTCAACCCCCAAAATGAACCTCACCTTAGAGGTATGTTGACTTCCACACGTGCTGCACAGTTATGGGGACTCAGAGAAAAGTCTAGGATTTTTGTATCTTCTGGCCGGTGGTTGATGGGTGTATTAGATGAGTTGGCTGTGCTTGAACAAGGGCAATGCTTTGTTCAAGTGTCTACTCCCTCACTTGAGAATTGTTTCTCAAAGCATGGGTCAAGATTTTCAGAGACAAAGAACCTTCACATAGTGAAAGGTTTGGTGGTTATAGCAAAAAATCCTTGTCTTCACCCAGGTGATGTAAGAGTTTTGGAGGCAGTTGATGCTCCTGAATTGCATCATTTACATGATTGTCTTGTGTTCCCTCAAAAAGGGGACAGACCTCATACAAATGAGGCTTCTGGAAGTGACCTTGATGGGGATCTTTATTTTGCCACATGGGATGAAAATCTTATTCCACCTAGTAAGAGTAGCTGGATACCTATGGATTATACTGCACAAGAAAGCCAACGTACCAACCGTCAAGTCACTACTCGGGACATTGTAGATTTTTTTGTCAGAAACATGGTCAATGAGCATTTGGGTACCATATGCAATGCACATGTTGTACACGCTGATTGCAGCGAGTATGGTGCCTTGGACGAGAAATGCATAAAACTGGCTGAGTTAGCAGCAACTGCGGTTGATTTTCCAAAGACTGGGAAGATTGTTGCGATGCCACCTCAATTGAAACCAAAATTGTACCCTGATTTTATGGGCAAGGAGCCGCACCAATCCTATAAATCCACAAAGATCCTTGGCAGACTTTACAGGAGTATCAAAGATGCCTATGATAAAGAAATCGATGCACCTGATTTGAACTATCCAACAGATGACATACCTTACGATACAGATCTTGAGGTTCCAGGATCTGCTGATTTTATTGCTGATGCATGGGAAAAGAAGTGCTCTTATGATGGTCAATTGAGTGGACTTCTTGGTCAATATAAAGTGAAAAGAGAAGAAGAGGTTGTCACTGGGCAGATCTGGTCTATGCCAAAATACAACAGTAGGAAGCAAGGGGAGCTGAAGGAGAGACTCAAACACTCATATAGTGCCCTGAAAAAAGAATTCCGGAACATGTTCGAGAAATTGAATTTGAACCCAGATGCAGGAGAATTAAGTGACGAAGAAAAGAATCTGTTGTATGAAAAGAAAGCTTCGGCGTGGTATCAGGTGACATATCATCCTGAGTGGGTAAAGAAGTCCCTTGAACTGCAATTCAAGTCCCCAGAGAGCCAGGAGCCAGGTAGTTTGGGGAATGTGGTGATGCTGAGTTTCCCCTGGATTGCTGTTGATTACCTTGCTCGCATGAAGATAAGGCATCGAAACTTTGGAAACTTCGACTCCACTAGGCCAGTTGATTCCCTGGCAAAGTACCTATCCGAAAGGTTATAG	3609	0.4176	MDSEGSEKETVVTQVSIGGFDREVRANDLVVFLEEKIGMVDRCRLKTSWTPPESYPDFSIIDTTRVKKTDAYQKVEPHAFVHFAMSEYVAEALNAAGRGDLVLNNSPLKVSCGPENPHFLRQRRRKTTPFKMCDVLVEIGTLVKPEEFVVAWRGPNKGVNFLVDPFDSMCKVCFNKDVVFAFKGKETKAVIKCDFQVGFLVRDINEIKQYKDMSSFVVLLHLASAPWVWYRTADDDIVESPIDLLDDDDPWARTTDFTPSGAIGRCNFYRISIPPRHGAKLVKAMHYLRAQRVQDISLRRPPRVLDELDFGVSMSDPFFCIHSQKGVAFDVIFLVNAVLHKGIINQHSLSDEFFELLRNQPKEVNVAALKHLCSYKRPVFDAAKRLKQVQEWLLRNPKLYQNSKQLDDVVEVRRLVITPTKAYCIPPEVELSNRVLRNYKELSDRFLRVTFMDEGMQTINANALNYYVAPIVKEITSNSFPQKTLIYRRVKNILEEGFHLCGRKYSFLAFSSNQLRDRSAWFFANASNETCDTIRNWMGKFKIHNIAKCAARMGQCFSSTYATVQVADGEVNYRLPDIVRNNYVFSDGIGIITTDLAGEVAEKLKLDSVPSAYQIRFAGFKGVVASWPAKGDEHRLSLRPSMDKFSSNHKTLEICAWTRFQPGFLNRQIITLLSALDVSDEIFWQMQKAMISRLNEMLVDANVAFEVLTKSCAEHGNAAAIMLSCGFNPQNEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDELAVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLHIVKGLVVIAKNPCLHPGDVRVLEAVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFATWDENLIPPSKSSWIPMDYTAQESQRTNRQVTTRDIVDFFVRNMVNEHLGTICNAHVVHADCSEYGALDEKCIKLAELAATAVDFPKTGKIVAMPPQLKPKLYPDFMGKEPHQSYKSTKILGRLYRSIKDAYDKEIDAPDLNYPTDDIPYDTDLEVPGSADFIADAWEKKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRNMFEKLNLNPDAGELSDEEKNLLYEKKASAWYQVTYHPEWVKKSLELQFKSPESQEPGSLGNVVMLSFPWIAVDYLARMKIRHRNFGNFDSTRPVDSLAKYLSERL	1202

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g02523	1202	PANTHER	RNA-DEPENDENT RNA POLYMERASE	7	1201	IPR007855	GO:0003968
	Adu08g02523	1202	Pfam	RNA dependent RNA polymerase	417	997	IPR007855	GO:0003968
	Adu08g02523	1202	PANTHER	RNA-DEPENDENT RNA POLYMERASE 6	7	1201	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g02523	Adu-Chr8	41189012	41196519	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g02523	K11699		-	gmx:100795178	2013.81

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu08g02523	08	41189012	41196519	Adu08g02523	08	41189012	41196519	ECH