Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02517 ATGGGTAGGAAGGGACACCAACTATTCGACGAAAAGAATGATGGGTTTTTTTTCTCTGTTTCCAATTTGGGTTCTCAATGGAGCCTCCAAGAACAACAACAAGGTTCCTATTACCACCCAGGAGGCTTGTTTGCAAGCGTTGGCCAAATGGGTACCATGGGTTTTGGTGTTCAACAACCAAATCCTTCTTCTTCAGCTGATTCTGATTCACGTGACAATGACAACGGTGGTTTGAAACTACCCTTCAATGATTTGTACGTTAAGTATGTTCAGTGTCTTGGGAAAGTTCAGTTCTTTGAGGAAGGGGAGGAAGGGGTTAAGGCTAAGAAGAAAAGGAGTGGCCTTAAATTGAAGGTTAGGATCAGGAACCCTTCTCTGAGGAGGCTTTTCAGTGGGGCAATTGCAGGCGCTATTTCGCGAACCGCAGTGGCACCATTGGAGACTATAAGGACTCACTTGATGGTTGGAAGCAGTGGCCATTCCACCACTGAGGTGTTCCATAATATCATGAAGACTGATGGATGGACAGGGTTGTTTAGGGGTAATTTTGTTAATGTCATTCGGGTTGCACCTAGTAAGGCTATTGAGCTATTTGCTTATGATACAGTTAACAAGAACCTATCACCAAAGCCCGGGGAACAGCCTAAAGTTCCTATTCCTGCCTCATTGATTGCAGGTGCCTGTGCCGGAGTGAGTTCAACTATATGCACATATCCTCTCGAGTTGGTCAAAACTCGACTAACTATCCAGAGAGGTGTTTACAACGGTCTACTCGATGCATTCTTGAAAATAATTCGAGAGGAGGGTCCGGCGGAACTTTATAGAGGCCTTGCCCCCAGTCTTATTGGAGTCATTCCGTATGCTGCCACCAATTACTTTGCCTATGACACCTTACGGAAAGCATACCGGAAGATTTTTAAGCAAGAAAAGATTGGTAACATTGAAACCCTTTTGATTGGATCGGCAGCCGGTGCTATCTCAAGCAGTGCAACGTTTCCACTTGAGGTGGCTCGCAAGCATATGCAAGTGGGAGCTCTGAGTGGAAGACAAGTTTACAAAAATGTGATTCATGCCCTTGCAAGCATACTAGAACACGAAGGGATTCCCGGTTTATATAGAGGGCTCGGGCCTAGTTGCATGAAATTAGTGCCGGCTGCCGGAATCTCTTTCATGTGCTATGAAGCATGCAAGAGGATATTGGTAGACGACGATGAAGAGGCGTAA 1224 0.4559 MGRKGHQLFDEKNDGFFFSVSNLGSQWSLQEQQQGSYYHPGGLFASVGQMGTMGFGVQQPNPSSSADSDSRDNDNGGLKLPFNDLYVKYVQCLGKVQFFEEGEEGVKAKKKRSGLKLKVRIRNPSLRRLFSGAIAGAISRTAVAPLETIRTHLMVGSSGHSTTEVFHNIMKTDGWTGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKVPIPASLIAGACAGVSSTICTYPLELVKTRLTIQRGVYNGLLDAFLKIIREEGPAELYRGLAPSLIGVIPYAATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEHEGIPGLYRGLGPSCMKLVPAAGISFMCYEACKRILVDDDEEA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02517 407 Pfam Mitochondrial carrier protein 125 207 IPR018108 -
Adu08g02517 407 Pfam Mitochondrial carrier protein 217 304 IPR018108 -
Adu08g02517 407 Pfam Mitochondrial carrier protein 311 402 IPR018108 -
Adu08g02517 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 311 399 IPR018108 -
Adu08g02517 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 301 IPR018108 -
Adu08g02517 407 PANTHER SOLUTE CARRIER FAMILY 25 31 405 - -
Adu08g02517 407 SUPERFAMILY Mitochondrial carrier 124 395 IPR023395 -
Adu08g02517 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 206 IPR018108 -
Adu08g02517 407 MobiDBLite consensus disorder prediction 55 74 - -
Adu08g02517 407 PRINTS Mitochondrial carrier protein signature 128 141 IPR002067 GO:0055085
Adu08g02517 407 PRINTS Mitochondrial carrier protein signature 141 155 IPR002067 GO:0055085
Adu08g02517 407 PRINTS Mitochondrial carrier protein signature 181 201 IPR002067 GO:0055085
Adu08g02517 407 PRINTS Mitochondrial carrier protein signature 232 250 IPR002067 GO:0055085
Adu08g02517 407 PRINTS Mitochondrial carrier protein signature 274 292 IPR002067 GO:0055085
Adu08g02517 407 PRINTS Mitochondrial carrier protein signature 320 342 IPR002067 GO:0055085
Adu08g02517 407 MobiDBLite consensus disorder prediction 55 71 - -
Adu08g02517 407 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 31 405 - -
Adu08g02517 407 Gene3D Mitochondrial carrier domain 121 405 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02517 Adu-Chr8 41101649 41105230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02517 1 407 Organic Solute Cotransporters AT4G32400 67.726 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02517 K14684 - zju:107406946 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02517 08 41101649 41105230 Adu08g02517 08 41101649 41105230 ECH
Adu06g02805 06 105288165 105290932 Adu08g02517 08 41101649 41105230 PCT