Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02500 ATGCAGGCTTTGCCGAATCAGCAAACCGTCGATTACCCTAGCTTCAAGCTCGTTATCGTCGGCGATGGTGGAACAGGAAAGACCACATTTGTGAAGAGACATCTTACTGGTGAATTCGAGAAGAAATATGAACCAACCATTGGTGTGGAGGTCCACCCATTGGATTTTTTCACAAACTGCGGGAAGATTCGTTTCTATTGCTGGGATACTGCTGGCCAAGAGAAGTTTGGTGGTTTGAGAGATGGATATTATATCCATGGGCAATGTGCGATCATAATGTTTGATGTCACTGCCCGGTTGACTTATAAAAACGTCCCTACTTGGCACCGTGATCTTTGCCGGGTCTGTGAAAACATCCCAATTGTTCTCTGCGGTAACAAGGTTGATGTGAAGAACAGACAAGTGAAAGCAAAGCAGGTTACCTTCCACAGGAAGAAGAATTTGCAGTACTATGAAATATCGGCCAAGAGCAACTATAACTTTGAGAAGCCTTTCCTTTACCTTGCCAGGAAGCTTGCAGGCGATCCCAACTTGCATTTCGTAGAGTCACCTGCCCTGGCTCCTCCAGAAGTTCAAATCGATTTGGCCGCGCAACAACAGCATGAAGCCGAGCTTGCTCAAGCTGCTAACCAGCCTCTTCCCGATGATGATGATGACACATTTGAGTAA 669 0.4619 MQALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAQAANQPLPDDDDDTFE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02500 222 ProSiteProfiles small GTPase Ran family profile. 8 172 IPR002041 GO:0003924|GO:0005525|GO:0006913
Adu08g02500 222 ProSiteProfiles small GTPase Rab1 family profile. 9 222 - -
Adu08g02500 222 PANTHER GTP-BINDING NUCLEAR PROTEIN 3 222 - -
Adu08g02500 222 SMART ras_sub_4 12 175 - -
Adu08g02500 222 PANTHER RAN GTPASE 3 222 IPR002041 GO:0003924|GO:0005525|GO:0006913
Adu08g02500 222 CDD Ran 15 180 - -
Adu08g02500 222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 196 IPR027417 -
Adu08g02500 222 SMART rab_sub_5 15 175 - -
Adu08g02500 222 MobiDBLite consensus disorder prediction 200 222 - -
Adu08g02500 222 SMART rho_sub_3 17 171 IPR001806 GO:0003924|GO:0005525
Adu08g02500 222 Gene3D - 4 220 IPR027417 -
Adu08g02500 222 Pfam Ras family 16 172 IPR001806 GO:0003924|GO:0005525
Adu08g02500 222 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 28 42 IPR002041 GO:0003924|GO:0005525|GO:0006913
Adu08g02500 222 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 169 191 IPR002041 GO:0003924|GO:0005525|GO:0006913
Adu08g02500 222 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 75 93 IPR002041 GO:0003924|GO:0005525|GO:0006913
Adu08g02500 222 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 95 116 IPR002041 GO:0003924|GO:0005525|GO:0006913
Adu08g02500 222 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 131 149 IPR002041 GO:0003924|GO:0005525|GO:0006913
Adu08g02500 222 ProSiteProfiles small GTPase Ras family profile. 6 206 IPR001806 GO:0003924|GO:0005525
Adu08g02500 222 SMART ran_sub_2 20 221 - -
Adu08g02500 222 TIGRFAM small_GTP: small GTP-binding protein domain 15 165 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02500 Adu-Chr8 40958014 40960171 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02500 K07936 - mnt:21408331 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02500 08 40958014 40960171 Adu08g02500 08 40958014 40960171 ECH