Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02459 ATGTTCAAGCAATTCCTCAGCAAGCTCCCTCGCAACAAGAAGGTTGATGCTGATGAGTCAAGCCAAGTTGATTCATCCTCTGAGCCAAGCTCCTCCATGGACATCCCTGAATCCCCACGTGCCGCTGGTAAAAACCACCATACAGACCGTGGCAGCTCTTCCAACGCAAAGTGGGCGTCTTCTATTTTTCCAGAAAGCACCATTGCAGGGATTGAAGCCTTGATCCCTTTCAAGGATGTTCCACCCTTGGAGAAGATGAACCTCTTTGTTAGCAAGCTCAACCTTTGTTGTGTCACCTTCGATTTCACCGACCCAAGTAAAAACACTGTCGAAAAGGACATAAAAAGAAGAACTTTGATTGAACTCGTTGATTTTGTAGCTTCTGGCTCTATTAAATTCACTGAGCCGGCTATTCTAGCAATGTGTAGAATGTGTGCCATCAACTTATTCCGTGTTTTCCCACCAAATTACCGGTCTCGGCGGTTGTCCGGTGGATCCGGTGGCAGAGATGGCGAGAATGATGATGATGAGCCATCTTTTGATCCTTCTTGGCCACACTTGCAAATTGTGTATGACTTGTTGCTTAAGTTTGTTAGTTCCCCTTGTCTTGATGCAAAGGTGGCAAAGAAATACATTGATTGTTCATTTATTTCGAGATTGCTAGAGTTGTTTGATTCAGAGGATCCTAGAGAGAGGGATTGCTTAAAAACCATAATGCATAGGGTTTATGGTAAATTCATGGTGCACAGGCCTTACATAAGAAAGTCCATTAACAATGTGTTCTTTAGGTTTGTGTTTGAAACTGAGAGGCACAATGGGATTGCTGAGTTGTTAGAGATCTTTGGAAGCATAATTAGTGGTTTTGCTCTGCCTTTGAAGGAGGAGCACAAGATCTTCTTATGGAGGGTGTTGATCCCCTTGCACAAGCCCAAATCCCTGGGGGTATACTACCAGCAATTGTCCTATTGCATCACTCAATTTATAGAGAAAGAGCCAAAGTTGGCGAGTACCGTCATTAGAGGATTGTTGAAATATTGGCCTATAACCAATAGTCAGAAGGAGGTGATGTTCCTTGGTGAATTGGAAGAAATTCTGGAAGTGATTAACATGGTAGAGTTCCAGAAGGTCATGCTGCCGTTGTTTTGGCGAATTGGATGCTGCATTAACAGTTCTCATTTTCAGGTAGCTGAAAGAGCTCTTTTCTTGTGGAACAACGACCACATCGTCAACCTGATTGCTCACAACCGTCAGGTAATCTTGCCGATCATATTACCGGCGTTAGATAGGAATTGTCAAGCCCATTGGAACCAGGCAGTTCTCAACTTAACTCTCAATGTTAGGAAGATATTTGTAGAGATGGATGAGAAGCTGTACGTTTCGTGCCTTGCTCGGTTCAAAGAGGAAGAAGCAAGGCAAAGCTCGGAAGCCGAGAAGCGGAAGGAAGCATGGAAACAACTCGAGAAAGCGGCCGGTGTCCGACCAGAGATTGGAAACACAACTGTTTTAGTTTAG 1512 0.4411 MFKQFLSKLPRNKKVDADESSQVDSSSEPSSSMDIPESPRAAGKNHHTDRGSSSNAKWASSIFPESTIAGIEALIPFKDVPPLEKMNLFVSKLNLCCVTFDFTDPSKNTVEKDIKRRTLIELVDFVASGSIKFTEPAILAMCRMCAINLFRVFPPNYRSRRLSGGSGGRDGENDDDEPSFDPSWPHLQIVYDLLLKFVSSPCLDAKVAKKYIDCSFISRLLELFDSEDPRERDCLKTIMHRVYGKFMVHRPYIRKSINNVFFRFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSLGVYYQQLSYCITQFIEKEPKLASTVIRGLLKYWPITNSQKEVMFLGELEEILEVINMVEFQKVMLPLFWRIGCCINSSHFQVAERALFLWNNDHIVNLIAHNRQVILPIILPALDRNCQAHWNQAVLNLTLNVRKIFVEMDEKLYVSCLARFKEEEARQSSEAEKRKEAWKQLEKAAGVRPEIGNTTVLV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02459 503 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 503 IPR002554 GO:0000159|GO:0007165|GO:0019888
Adu08g02459 503 PIRSF PP2A_B56 4 502 IPR002554 GO:0000159|GO:0007165|GO:0019888
Adu08g02459 503 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Adu08g02459 503 SUPERFAMILY ARM repeat 87 485 IPR016024 -
Adu08g02459 503 MobiDBLite consensus disorder prediction 1 57 - -
Adu08g02459 503 Coils Coil 466 486 - -
Adu08g02459 503 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 503 - -
Adu08g02459 503 Gene3D - 81 489 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02459 Adu-Chr8 40400326 40402263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02459 K11584 - gmx:100781390 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02459 08 40400326 40402263 Adu08g02459 08 40400326 40402263 ECH
Adu06g02768 06 104674578 104677282 Adu08g02459 08 40400326 40402263 PCT