Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02446 ATGCTGAGAAAGAGGAGCAGGTCACAGCAGAAGGATCAGAACCAAATGGATTCAAATTCTGATCACTATTCTCCTCAGTTCCTTGCTTTGGGGCAAAACAAAACTCAACAAAACCATTCAATTTTCAACAATGTCCCATGTCTCTTTGTTGGTTTTGGTCCTAAAGGTCTTTTAGATGCTGATTCAGTTAGAAGCCCTACTTCTCCATTAGATTCTAGAGTTCTTTCAAATCTTGGGAACCATGTTGTTAATATTAGGACCCCAAAATCATCATGTAATCAAAGGAGTTGGGATTGTTGCAAAGTAGGACTAAGCCTTATAGATTCATTGGAAGATTGTCCCAAGTTCAATGGGAAGATTCTAAGGTGTTCTGAGAGCAAGAACATTAGTGTTACTCCCAAGGCCTCAAATTGTGAAAAGGCCTATTTGGATTACAATTTTGATTCAACATCATCAAAGTCATTGCCTAAAGATTTTTGTAAGGCTCCTCCTCCTTTCACAACACAAAAAATTGGATCTATTCTCCAAAAGGGTGGTAGTGAGTCTAGTGTTCTATTTGAGATTGGAGATAGTGGCTTAGACCATGAGATTTTTGGGAAAACAAGGTCATGTTCATTGGATTCTTGTAGTCCGTTGAAGACCCTTTATTCTGATTTGGTTAATTCGTCGAATACCGATCCAAACAAGGACGATTTTGCTTTGAAAGATGTGGTTGTGATGAACACAACCACCCAATTGAGCTCCCCTCCTCATTTTATTGGAGGAAGCAAGAACTACTCAAAAAACACACTTTCCATGTGCTCTTGTTCCAATGAATTCATAAAGTCTTTATCAGCTAATGAGATTGAAAACTCTGAGGACTATACATGTGTGATTTCGCGAGGCCCGAATCCCAAAACAACTCACATTTTTTGTGATTGCATCTTGGAGACTCATCATGACAACAACGATGAGTTCAAGAATCATCTTAAAATTGAAGAGATGGAAAAGGAGAAGGGAGTAGTATCCCTGCTACAAACTCCAATCCATTATCCCTCTAGTGAGTTCTTAAGTTTCTGCCACCATTGCAAGAAGAAGCTTGAAGAGGGTAAAGATATTTACATGTATAGGGGTGAAAGAGCATTTTGCAGTCTAACATGCCGTGCCTTGGAGATCATGAATGACGAGGAGTTAGAGGAAGAATCAGATAATACTCCTTCTTCTAGGAACTCTCCAAATCAAGAACATGGTGAGAAACTTTTTGAGACTGGAATCATCACATCTAATAGATAG 1272 0.3892 MLRKRSRSQQKDQNQMDSNSDHYSPQFLALGQNKTQQNHSIFNNVPCLFVGFGPKGLLDADSVRSPTSPLDSRVLSNLGNHVVNIRTPKSSCNQRSWDCCKVGLSLIDSLEDCPKFNGKILRCSESKNISVTPKASNCEKAYLDYNFDSTSSKSLPKDFCKAPPPFTTQKIGSILQKGGSESSVLFEIGDSGLDHEIFGKTRSCSLDSCSPLKTLYSDLVNSSNTDPNKDDFALKDVVVMNTTTQLSSPPHFIGGSKNYSKNTLSMCSCSNEFIKSLSANEIENSEDYTCVISRGPNPKTTHIFCDCILETHHDNNDEFKNHLKIEEMEKEKGVVSLLQTPIHYPSSEFLSFCHHCKKKLEEGKDIYMYRGERAFCSLTCRALEIMNDEELEEESDNTPSSRNSPNQEHGEKLFETGIITSNR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02446 423 ProSiteProfiles Zinc finger FLZ-type profile. 348 392 IPR007650 -
Adu08g02446 423 PANTHER FCS-LIKE ZINC FINGER 11 1 416 IPR044585 -
Adu08g02446 423 PANTHER DUF581 FAMILY PROTEIN 1 416 - -
Adu08g02446 423 MobiDBLite consensus disorder prediction 1 25 - -
Adu08g02446 423 Pfam zinc-finger of the FCS-type, C2-C2 344 390 IPR007650 -
Adu08g02446 423 MobiDBLite consensus disorder prediction 390 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02446 Adu-Chr8 40219702 40222627 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02446 - - ahf:112771313 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02446 08 40219702 40222627 Adu08g02446 08 40219702 40222627 ECH
Adu06g02760 06 104563360 104570977 Adu08g02446 08 40219702 40222627 PCT