Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02425 ATGGGTTCGAGAAACACCTCTGTTCTGTGCTTGGCACTTTTCCTAGCTTTCTCTTCATGCATTCATGGGTTAGATATCACCAGCGCACTCAGCAAATACCCAGAATTCACCAAGTTCAGCAAGTACCTCACCGAAACCAAGCTTGTTGATCAAATCAACGGCCAGAAAGCCGTTACCGTCCTCGCCCTCAGCGACGACGCACTCGCCTCCCTTGACGGGAAGCCCCAGGACTACATCAAGGCAGTCCTGGCCAACCACGTGGTTACCAATTACTACGACGAGAAGCTTCTCGTCGCAGCAGTTGGTAGCCACGAGAAGTTGGCGACACTCTCATCTTCTGGAATCTTCGTCAACTTGATAAACGATGGCGAGGTGGCTTTTGCACCCGCCGAGAAAGAACAGTATGAGAGCAAGCTCGTCAGAACCGTTGACACTCAACCCGAATCACTTTCAATCTTGGAGGTTCACCAGCCTATTTTTGCTCCATCCGCCGTTGCCAACGCCGTCGCAGCCACCGTGTCGTCGGAAGGGAAGAAGGTTCAAGAAGCAGCAGCCGGTATTAGCGGCGGTTGTCGCGTCGAGATGGGGCTCTTTGGCGGAGTAGTTATTGCCTTGGTTTCGCTCTTTGCTTCATTGTAA 639 0.5227 MGSRNTSVLCLALFLAFSSCIHGLDITSALSKYPEFTKFSKYLTETKLVDQINGQKAVTVLALSDDALASLDGKPQDYIKAVLANHVVTNYYDEKLLVAAVGSHEKLATLSSSGIFVNLINDGEVAFAPAEKEQYESKLVRTVDTQPESLSILEVHQPIFAPSAVANAVAATVSSEGKKVQEAAAGISGGCRVEMGLFGGVVIALVSLFASL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02425 212 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 175 IPR033254 -
Adu08g02425 212 Pfam Fasciclin domain 34 120 IPR000782 -
Adu08g02425 212 SUPERFAMILY FAS1 domain 20 122 IPR036378 -
Adu08g02425 212 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Adu08g02425 212 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 2 175 - -
Adu08g02425 212 Gene3D FAS1 domain 24 173 IPR036378 -
Adu08g02425 212 ProSiteProfiles FAS1/BIgH3 domain profile. 23 159 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02425 Adu-Chr8 39945957 39946991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02425 - - adu:107463005 385.185