Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02421 ATGGAAGGTTCTGGAAGCAGCGTTTCGGCGTCATCATCGGCAGCGATGGCGCAACAAACATGGGAGCTGGAAAACAACATAATACCCATGGACACACCACCTTCCGGCGCCGACGACTCCATCTTCTACTATGACGAGTCACTCCAAGGAGAGTACCAGCGCGAAAAGCCATGGTCCAACGACCCTCACTACTTCAAGCGCGTCAAGGTTTCCGCTCTCGCGTTACTCAAGATGGTTGTTCACGCGCGTTCTGGCGGCACCATCGAGGTCATGGGTCTCATGCAAGGCAAGATCGACGGTGACTCTATCATCGTCATGGATGCTTTTGCTTTGCCCGTTGAGGGAACCGAAACGCGTGTCAATGCCCAAGCTGATGCGTATGAGTACAGTGTTGAGTATGATCAGACCAACAAGCGTGCTGGGCGACTGGAAAATGTTGTTGGGTGGTATCACTCTCACCCTGGTTATGGGTGCTGGCTTTCTGGTATAGATGTGTCGACACAGATGCTCAATCAGCAGTTTCAGGAGCCCTTTCTGGCTGTTGTTATTGACCCCACTAGGACTGTTTCTGCTGGGAAAGTTGAGATTGGGGCCTTCAGGACATACCCTGAAGGGTATAAGCCTCCTGATGATCCTATTTCCGAGTACCAAACCATACCCCTCAATAAGATTGAAGACTTTGGTGTCCATTGTAAACAGTATTATTCATTGGATATCACTTACTTTAAGTCTTCTCTTGATTCACACCTCTTGGATCTGCTATGGAACAAATATTGGGTGAATACGCTTTCTTCTTCTCCTCTATTGGGTAATGGGGACTATGTTGCTGGACAAATCTCAGATTTAGCTGAAAAATTAGAACAAGCAGAGACTCAATTGGCGCATGCACGCTTTGGACCATTATTAGCACCTGCTCCGAGAAAGAAAGAAGAAGAGTCTCCACTCGCTAAGATTACTCGTGATGGTGCAAAAATTACTGTGGAGCAAGTGCATGGACTAATGTCACAGGTAATCAAGGATATTCTATTCAACTCTGTTCAATCAAGTAGGTCTCGCACAGAAACATCTGGCCCTGAGCCCATGATTGAAAGTTGA 1095 0.474 MEGSGSSVSASSSAAMAQQTWELENNIIPMDTPPSGADDSIFYYDESLQGEYQREKPWSNDPHYFKRVKVSALALLKMVVHARSGGTIEVMGLMQGKIDGDSIIVMDAFALPVEGTETRVNAQADAYEYSVEYDQTNKRAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAETQLAHARFGPLLAPAPRKKEEESPLAKITRDGAKITVEQVHGLMSQVIKDILFNSVQSSRSRTETSGPEPMIES 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02421 364 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 31 351 - -
Adu08g02421 364 SMART pad1_6 67 204 IPR000555 GO:0005515|GO:0008233|GO:0008237
Adu08g02421 364 PANTHER BNAC07G13420D PROTEIN 31 351 IPR037740 GO:0004222|GO:0008180
Adu08g02421 364 Pfam Cop9 signalosome subunit 5 C-terminal domain 264 344 IPR040961 -
Adu08g02421 364 CDD MPN_RPN11_CSN5 57 329 - -
Adu08g02421 364 Gene3D Cytidine Deaminase, domain 2 9 270 - -
Adu08g02421 364 ProSiteProfiles MPN domain profile. 68 205 IPR037518 -
Adu08g02421 364 SUPERFAMILY JAB1/MPN domain 67 204 - -
Adu08g02421 364 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 65 176 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02421 Adu-Chr8 39917899 39922216 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02421 K09613 - gmx:100784909 652.514