Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01999 ATGGATCGGGTTCTGAGGGCGGCGCGTGCCTCCGGTTCCCTCAACCTCTCAAATCGCAACCTCCGACACGTTCCCGATGAGGTGTATCGCAATCTCGACGGCCTCGGCGGCGACGACAAGTGGTGGGAGGCTGTGGAGCTTCAGAAGCTGATTTTGGCTCACAATAGCATTGAATCTTTGAAGGATGATATTCGCAACTTGCCTTGCCTTGCTGTCTTGAATCTTAGCCACAACAGGCTTTCTGAGCTCCCGGCTGCTATCGGAGAGCTGCCCCAGTTGAAGCTGTTGGATGTTTCATTCAATTTGATATCTAAAATACCAGAGGAAATTGGCTCAGCAACATCACTTGTTAAGCTTGATTGTTCAAACAATCAGCTCAAGGAACTTCCAAGCTCACTTGGCAGATGCTTAGAATTGTCCGACCTAAAGGGATCAAACAATCTTATTGCAAGCTTGCCAGAAGATTTAGCAAATTGTTCCAAATTGTCCAAGCTAGATATGGAGGGAAACAAGTTAACAGAGATATCTGAAAATCTCTTTTCATCATGGGCCATGCTTACTGAATTCAATGCATCAAAAAACTTGTTGAATGGCATACCAGACAGCATTGGAGGCCTTTCACGTCTAATTCGTCTTGATCTCCACCAAAACAGTGAGCTCTTTGAACAAAGGGTCAATGGTTTTTTGTTTCTCCTTTCTTCATCTTGTCTTAAATCTAGCGTGTCTATGTGTTGTGCAGGAATCTCGTCAATCCCTTCATCAATCATGGGTTGTCATTCACTTGCTGAGATTTATTTGGGGAATAACAACCTTTCTACAGTACCTATGGAGATTGGGGCACTTTCTCACCTAGGGACTTTAGATCTTCACTCTAACCAGCTGAAAGAGTATCCAGTGGAGGCATGCAAATTGAATCTTCTTGTGTTGGATCTTTCAAACAATTCATTGAGTGGGTTACCCGCTGAAATTGGTAAGATGACCACCTTGAGGAAACTTTTGCTTACTGGAAATCCTTTGCGGACTCTCCGAAGCTCATTAGTCAATGGACCTACACAAGCATTACTCAAATATCTCCGAAGTAGACTTTCTGAAGCTGAAGATTCTGGAGCAGTAATCACAGAAAAAGATGAAGTAATTGCAATGGCTACCCGGCTGTCTATCACTTCAAAGGAACTTCCAATGGAAGGACTGGGGTTGAATTCAGTTCCACCAGAAGTATGGGAATCAGGGGAAGTCATGAAACTTGACCTTTCCAAAAACTCCATCCAGGAGTTGCCTGTTGAGCTTTCTTCTTGTGTATCCCTCCAGACATTGATTTTATCTAAGAATCAAATTAAAGACTGGCCAGGTTCAATTCTTAAGTCACTTTCTAGTTTGTCATGTCTGAAGCTGGACAACAATCCTCTGAGGCAGATACCATCAGATGGTTTTGAAGCGGTGCCTATGCTTCAGATCCTGGATCTCAGTGGTAATGCAGCTTCATTAGTTTATGGACCTTCATTTTCTTGTTTGACACACCTTCAAGAGCTTTACCTGAGGAGAATGCAGCTCAGTGAGTTCCCATCAGATATACTGAAGTTGCATCAACTACAGATCCTTGATTTGAAACAGAATTCCCTTCAGTCAATTCCTGTGGGGATAAAAGATCTCACTTCTCTCAAGGAGCTTGATTTATCTGATAACAACATCTCAGCCCTTCCACCTGAGCTGGGTTTGCTGGAGCCAAGCCTTCAAGCATTGAGACTTGATGGGAATCCACTCAGAAGCATTCGGAGGACTGTCTTGGATAAAGGAACTAAAGCTGTTCTGAATTATTTGAAGGACAAACTACCGGAGCAATAA 1842 0.4343 MDRVLRAARASGSLNLSNRNLRHVPDEVYRNLDGLGGDDKWWEAVELQKLILAHNSIESLKDDIRNLPCLAVLNLSHNRLSELPAAIGELPQLKLLDVSFNLISKIPEEIGSATSLVKLDCSNNQLKELPSSLGRCLELSDLKGSNNLIASLPEDLANCSKLSKLDMEGNKLTEISENLFSSWAMLTEFNASKNLLNGIPDSIGGLSRLIRLDLHQNSELFEQRVNGFLFLLSSSCLKSSVSMCCAGISSIPSSIMGCHSLAEIYLGNNNLSTVPMEIGALSHLGTLDLHSNQLKEYPVEACKLNLLVLDLSNNSLSGLPAEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTQALLKYLRSRLSEAEDSGAVITEKDEVIAMATRLSITSKELPMEGLGLNSVPPEVWESGEVMKLDLSKNSIQELPVELSSCVSLQTLILSKNQIKDWPGSILKSLSSLSCLKLDNNPLRQIPSDGFEAVPMLQILDLSGNAASLVYGPSFSCLTHLQELYLRRMQLSEFPSDILKLHQLQILDLKQNSLQSIPVGIKDLTSLKELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTVLDKGTKAVLNYLKDKLPEQ 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01999 613 ProSiteProfiles Leucine-rich repeat profile. 552 573 IPR001611 GO:0005515
Adu08g01999 613 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Adu08g01999 613 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Adu08g01999 613 SMART LRR_typ_2 456 479 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 159 182 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 550 573 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 45 66 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 504 526 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 67 88 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 305 325 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 90 113 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 114 136 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 527 549 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 575 597 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 410 432 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 326 349 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 433 455 IPR003591 -
Adu08g01999 613 SMART LRR_typ_2 281 304 IPR003591 -
Adu08g01999 613 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 14 131 - -
Adu08g01999 613 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 248 613 - -
Adu08g01999 613 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 136 217 - -
Adu08g01999 613 Gene3D Ribonuclease Inhibitor 130 232 IPR032675 -
Adu08g01999 613 PRINTS Leucine-rich repeat signature 550 563 - -
Adu08g01999 613 PRINTS Leucine-rich repeat signature 306 319 - -
Adu08g01999 613 Pfam Leucine rich repeat 529 587 IPR001611 GO:0005515
Adu08g01999 613 Pfam Leucine rich repeat 46 103 IPR001611 GO:0005515
Adu08g01999 613 Pfam Leucine rich repeat 161 217 IPR001611 GO:0005515
Adu08g01999 613 Pfam Leucine rich repeat 283 339 IPR001611 GO:0005515
Adu08g01999 613 Pfam Leucine rich repeat 458 514 IPR001611 GO:0005515
Adu08g01999 613 ProSiteProfiles Leucine-rich repeat profile. 434 455 IPR001611 GO:0005515
Adu08g01999 613 SUPERFAMILY L domain-like 13 219 - -
Adu08g01999 613 Gene3D Ribonuclease Inhibitor 497 609 IPR032675 -
Adu08g01999 613 Gene3D Ribonuclease Inhibitor 233 361 IPR032675 -
Adu08g01999 613 Gene3D Ribonuclease Inhibitor 5 128 IPR032675 -
Adu08g01999 613 Gene3D Ribonuclease Inhibitor 367 496 IPR032675 -
Adu08g01999 613 PANTHER LRR RECEPTOR-LIKE KINASE 14 131 - -
Adu08g01999 613 PANTHER LRR RECEPTOR-LIKE KINASE 248 613 - -
Adu08g01999 613 PANTHER LRR RECEPTOR-LIKE KINASE 136 217 - -
Adu08g01999 613 ProSiteProfiles Leucine-rich repeat profile. 305 326 IPR001611 GO:0005515
Adu08g01999 613 SUPERFAMILY L domain-like 240 589 - -
Adu08g01999 613 ProSiteProfiles Leucine-rich repeat profile. 69 90 IPR001611 GO:0005515
Adu08g01999 613 SMART LRR_bac_2 67 86 - -
Adu08g01999 613 SMART LRR_bac_2 527 546 - -
Adu08g01999 613 SMART LRR_bac_2 113 132 - -
Adu08g01999 613 SMART LRR_bac_2 258 277 - -
Adu08g01999 613 SMART LRR_bac_2 550 570 - -
Adu08g01999 613 SMART LRR_bac_2 90 109 - -
Adu08g01999 613 SMART LRR_bac_2 303 322 - -
Adu08g01999 613 SMART LRR_bac_2 159 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01999 Adu-Chr8 33429373 33435900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01999 90 587 Receptor kinase-like Gene Family AT4G08850 27.713 1.12e-18 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01999 - - gmx:100781571 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01999 08 33429373 33435900 Adu08g01999 08 33429373 33435900 ECH