Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01972 ATGGCAGCCTCACTCACCCGTTCTTCTAGAAGCCTTTGCCTCAGCTTCTCTGTCGAGACGCCCACATTGTCTAGTGACGCCATTAGCTCGCTGTTCGAGATCCTTGGAAGCATGTCCTTCACCGCTTACAATGCCTCCATTCATGCCGTCCAATCCTCTATGTCTGCTATCAAGTGCATCCTCTTCGTTACCCCACCACCGGCAGCAGCGGTTGCTCCTGCTGCTATTGTTGCTGGCTCTCCCGCCCGTGGTTGCCGTTGTTGTTGTTATTTTGTTGCTGCTGCTGCTGTTGCCACCACCGGTAGAGTGGTTGCTTTCATAACTGTAGCTGAATCGGATTTGACAGAGGCGGCAAGGAGAAGAGGCATGGTGAAGTCCGCGAGATCCATGGCAAACTTCCTCGCTCAGTTCCAATCCATCAAGAGTACCTCCGATCGCCTCGTCATTTCAGTCGAGGATGTGAGTGACTTGTGGCCGGCTGTCAAGCCTGCTTTTGAAGCACGGTTGCCGTTCAAGCAAGGGTCTTTGAATAACAAGACACGGAACCCTGTCTTAGTCGAGAAGTTGCCAGCTGAGTTCATATTAACTACAGATTCAAGGCTACGGAGCCGCTTCCCTCAGGAGCAGCTGTTATTTTGGTTTCGAGAGCCGTATGCAACTATTGTACTTGTTACCTGTGAGGATCTTGATGAGTTCAAAACGATCCTCAAACCACGTCTGAAATTAATTGTCCAAAATGATGAGAGAGAATGGTTTATTGTATTTGTATCTAGAGCTCATCCAGCAAATGATAAGGCAAGCGCAATGGCAAAAAAAGTATATGCCAAACTTGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAGTATGATATACATTTGCCTGAATCAAATTTTTGGGAAGATCTAGAATCAAAGATAATGGAGTGCATCAGAAATACACTGGATAAGCGTGTACAATTTTATGAGGAAGAGATAAGAAAGCTCAGCGAACAGCGGCTCATGCCAGTCTGGAACTTCTGTAATTTTTTCATTCTGAAGGAAAGCTTGGCGTTTATGTTTGAAATGGCACACCTCCATGATGATGCCTTACGGGAGTATGATGAACTTGAACTCTGCTATATTGAAACAGTTAACAACACTGGAAAGCAAAGAGACTTTGGAGGGGCAGACCATGGTGACGATCAAGCAGCATTGCTTAATCCAGGAAACAAAGCTTTGACGCAGATTGTCCAAGATGACTCATTCAGGGAGTTTGAATTTCGACAGTATCTATTTGCCTGTCAATCAAAGCTCTTATTCAAGCTAAATCGTCTATTTGAGGTTGCATCAAGAGGTTATTCGTTCATAATAAGCTTCTCAAAATCTTTGGCACTGCATGAGCGTATTCTGCCCTTTTGCATGCGTGAAACCTGGGTGGTAACTGCTTGCTTGGCTTTAATTGACGCAATACTTTCTAATTATAATGATGGACTTATGGCACCTGACATAGAGAAAAGGTTCTTTCATCTTCTAGGTGACCTATATTCGCTAGCAAGAGTGAAGTTCATGAGGCTTGCCTATTTAATTGGATATGGAACTGAAATTGAAAGAAGTCCTGTCAACAGTGCTGCTCTCAGCTTGCTATCTTGGCCTAAGCCAGCAGTTTGGCCTTCAGTTCCTGCAGATGCCTCAGCAGAGGTGCTTGAGAAAGAAAAGGTGATTCTTCAAACTACGTCTAGAACCAAGCCTTTTGGTATCCAGAGGAAGCCCCTGCCTCTTGAACCTACTGTGCTGCTGCGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGCATTTGAAACATTTGATGGTCGCCAGGGTATAACCGAAGGATCAGGTTTTGATGCATCCACAAGGATGTCGCCATCACAGAAAGTACCTCCAAGTTCCATACCGCGCACTAATTCTTCACCTGGAAACTTTGATGGCTCAATTGACCGGCCTATGAGGCTTGCTGAGATTTTTGTTGCTGCTGAGCATGCTTTGAAGAAAACAATTTCCAGCCAAGAACTGTTGAAATCATTATCATCATCTGAGGAATTTGAGCAAAAATATTTGGAGCTAACTAAAGGTGCTGCTGACAATTATCATCGTTCCTTGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATAGCAGCTGTCTCCTTTAAGCATGGGCATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTTTATTCCGGTGAAGGATGGCAGGACTTGTTGGCTGAGGTCCTCCCTAATTTAGCCGAGTGTCAGAAGATACTCAATGATCAAGCTGGTTACTTACTATCTTGTGTGAGGGATCCTGGTACCCTTTCTGTTACTGTTTGGAGTGGTTTTCCAGATGATATAACTCTTGATTCAATTAATCTTACGTTAGTGCCAACATCTAGTGTTGATGAAGGTGCAAAGGCATTGCAGAGTTCTACACCTAATGTGTTACATCCTGGTCGGAATACTATTACCTTGGATCTGCCACCCCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCAAAAATAGGTCCTGCAGATACTGATGATTTCATGAGTTACGAAAAGCCGGCTAAACCTATTTTGAAGGTGTTAAGGCCTAGAGCTCTGGTTGATCTTGATGCTGCTGTTTCCTCGCCTTTGTTAACAAATGAACGTCAGTGGATTGGTATTTTAGTTCGACCGATAAATTATTCCCTCAAAGGTGCTGTCTTGTATATTGATACTGGCCCAGGGTTGGAGATTGATGACTCGCATGTCATTGAGATGGAAACCTATGCTGGTGTATCAGAGAATGATGACAACAAGGTGCAGAAAGACGGTGCTCAGATAGACTCTTTAAATTATGAGAAGAAGGTTGAACGCTTGACTCTTCATAATGGAAAAATTGAGTTTCCAAATTGGGCAATTACAACTAGGAGAGAGAGCATTGTAGATGCCATGAGAACAATTGCTCTGAACCTTGAATTTGGAGTATACCACAATCAGATATTCGAAAGGACCCTGGCAGTTCATTTTACATATCCTTTCTATGTGACGACACGTGTAACCGATAAATGCAATGATGGTACATTGCTTTTGCAGGTTATACTTCACTCTGAAGTAAAGGCTACACTGACCATATATGATGCTTGGCTTGATCTTCAACATGGATTTATTCATAATGGTCAAACTGAGGGTAGACCTAGTTCAAGCCTCTTCCCACTAGTCATATCTCCTACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTTGGCAAGACAAATGGAGAAGAAGACAGAAAGCAGCAAGAAAGCATATTAAATATCAAATATGGAATTTCTGGTGATAGAACAATTGGAGCCCACCCTCCTGTCATGGATGAATCTACTAAAGTTGATGGTGCCAGACAGGAGTTGATCTTCAAGAATGCAATTACTTTGCAAAGGCCTGTGCTTGATCCATGCTTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGTCTAAGAGTTGGGCAACTAGTTAAGATGCAATGGAGGGTGGAAAGGTTAAAGGATTTGGATGAGAAAGAAGTTCCTGAACAGAATGATGAGGTTCTATACGAGGTAAAAGCGAATTCTGGAAATTGGATGATAGCTGGGAGGAAACGAGGGCATGTGTCGCTCTCCCCAAAACAAGGTGCAAGGATAATTATCTCAGTATTATGCATGCCACTGGTAGCTGGCTATGTTCGCCCGCCTCACCTTGGGCTACCAGACGTTGATGAAGCGAATGTAAGCTGCAAACCTGCTGGGCCGCATCTGGTTTGCGTTTTGCCCCCAGCTCTGAGCTCATCCTTCTGCATTCCAGTCAATTCATGA 3924 0.4378 MAASLTRSSRSLCLSFSVETPTLSSDAISSLFEILGSMSFTAYNASIHAVQSSMSAIKCILFVTPPPAAAVAPAAIVAGSPARGCRCCCYFVAAAAVATTGRVVAFITVAESDLTEAARRRGMVKSARSMANFLAQFQSIKSTSDRLVISVEDVSDLWPAVKPAFEARLPFKQGSLNNKTRNPVLVEKLPAEFILTTDSRLRSRFPQEQLLFWFREPYATIVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSRAHPANDKASAMAKKVYAKLEVEFNTKKRERCCKYDIHLPESNFWEDLESKIMECIRNTLDKRVQFYEEEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYIETVNNTGKQRDFGGADHGDDQAALLNPGNKALTQIVQDDSFREFEFRQYLFACQSKLLFKLNRLFEVASRGYSFIISFSKSLALHERILPFCMRETWVVTACLALIDAILSNYNDGLMAPDIEKRFFHLLGDLYSLARVKFMRLAYLIGYGTEIERSPVNSAALSLLSWPKPAVWPSVPADASAEVLEKEKVILQTTSRTKPFGIQRKPLPLEPTVLLREANRRRASLSAGNAFETFDGRQGITEGSGFDASTRMSPSQKVPPSSIPRTNSSPGNFDGSIDRPMRLAEIFVAAEHALKKTISSQELLKSLSSSEEFEQKYLELTKGAADNYHRSLWKRHGVVLDGEIAAVSFKHGHFDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRDPGTLSVTVWSGFPDDITLDSINLTLVPTSSVDEGAKALQSSTPNVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKIGPADTDDFMSYEKPAKPILKVLRPRALVDLDAAVSSPLLTNERQWIGILVRPINYSLKGAVLYIDTGPGLEIDDSHVIEMETYAGVSENDDNKVQKDGAQIDSLNYEKKVERLTLHNGKIEFPNWAITTRRESIVDAMRTIALNLEFGVYHNQIFERTLAVHFTYPFYVTTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQHGFIHNGQTEGRPSSSLFPLVISPTSKAGILFSICLGKTNGEEDRKQQESILNIKYGISGDRTIGAHPPVMDESTKVDGARQELIFKNAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDLDEKEVPEQNDEVLYEVKANSGNWMIAGRKRGHVSLSPKQGARIIISVLCMPLVAGYVRPPHLGLPDVDEANVSCKPAGPHLVCVLPPALSSSFCIPVNS 1307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01972 1307 MobiDBLite consensus disorder prediction 615 655 - -
Adu08g01972 1307 PANTHER BNAC09G30770D PROTEIN 784 998 - -
Adu08g01972 1307 PANTHER BNAC09G30770D PROTEIN 130 783 - -
Adu08g01972 1307 PANTHER BNAC09G30770D PROTEIN 998 1305 - -
Adu08g01972 1307 MobiDBLite consensus disorder prediction 623 654 - -
Adu08g01972 1307 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 784 998 IPR045126 GO:0048193|GO:1990071
Adu08g01972 1307 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 130 783 IPR045126 GO:0048193|GO:1990071
Adu08g01972 1307 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 998 1305 IPR045126 GO:0048193|GO:1990071
Adu08g01972 1307 Coils Coil 314 334 - -
Adu08g01972 1307 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1189 1275 IPR022233 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01972 Adu-Chr8 32842325 32856993 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01972 K20307 - gmx:100787264 2016.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01972 08 32842325 32856993 Adu08g01972 08 32842325 32856993 ECH