Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01906 ATGGTTGTCACAGCTCACAGGGCTATCAAAGATGAAGCAACTTGGTTGCAATCTTTCTACAATAAGACAGAGAAGGAGCAGAACAAGCATGCCATTGCTGTTGCTGCTGCTACTGCAGTTGCAGCTGATGCTGTTGTGGTAGCAACACAAACTGCAGTTAAGTGGTTAGGCTCACCAGCCATGGAAGAGACTCAGTTCCAAGATTACTTGCCCTTCATGGCCAACAAGCTTGGTGGGGATGGCCTAATTGATGAGCTATGCAATGGTTTCAATCTCTTGAAGGATTCAGATAAAGGGGTTATAACGTTTGAGAGCCTCAAGAAGAATTCAGCTTTGCTTGGCCTTCAAGGGTTGAGTGATGAGGACCTTAAGTCAATGGTCTTGGAAGGGGACTTTGATGGTGATGGTGCACTCAACCAGATGGAGTTCTGTGTTTTGATGTTCAGATTGAGCCCTGAACTCATGGAAGGTTCAAAGTTGTGGCTGGACCATGTTCTTCAACAAGAACTCCAAGATTATTCTTTCTAA 528 0.4489 MVVTAHRAIKDEATWLQSFYNKTEKEQNKHAIAVAAATAVAADAVVVATQTAVKWLGSPAMEETQFQDYLPFMANKLGGDGLIDELCNGFNLLKDSDKGVITFESLKKNSALLGLQGLSDEDLKSMVLEGDFDGDGALNQMEFCVLMFRLSPELMEGSKLWLDHVLQQELQDYSF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01906 175 PANTHER CALCIUM-BINDING PROTEIN KRP1 62 173 - -
Adu08g01906 175 SUPERFAMILY EF-hand 65 147 IPR011992 -
Adu08g01906 175 Pfam EF-hand domain pair 98 149 IPR002048 GO:0005509
Adu08g01906 175 Gene3D - 63 174 - -
Adu08g01906 175 PANTHER CALCIUM-BINDING PROTEIN KIC 62 173 IPR044205 GO:0005509
Adu08g01906 175 ProSiteProfiles EF-hand calcium-binding domain profile. 118 153 IPR002048 GO:0005509
Adu08g01906 175 ProSitePatterns EF-hand calcium-binding domain. 131 143 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01906 Adu-Chr8 31618528 31621920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01906 62 170 EF-hand Containing Proteins AT5G54490 64.545 2.58e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01906 K24345 - gmx:100306396 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01906 08 31618528 31621920 Adu08g01906 08 31618528 31621920 ECH