Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01850 ATGCAGCTTCACATATCACCAAGTTTAAGACATGTAACTGTGCTACCAGGAAAAGGGTTGAAGGAATTCATCAAAGTGAAGGTTGCGTCGCGGCGAGTCTCTTATAGGATGCTCTTCTATTCACTCCTGTTCTTCACATTCCTTCTCAGGTTTGTGTTTGTTTTGACATCAGTGGATGGCATTGATGGAGGAGAAACCAAGTGCTCTACCATAGGTTGCTTGGGAAAAAAACTGGGGCCAAAACTTATGGGGAAAAAGACTGAATCAAATGTGCCAGACGTAATATACCAAACATTAGATGCACCCCTTGACAAAGATGAGCTAAGGGGAAGATCTGATATTCCACAGACTTTAGAAGAGTTCATGACAGAAGTTAAGAAAGGTGGATTTGATGCCAAGACATTTGCTGTTAAACTCAGAGAAATGGTGACCCTTATGGAACAAAGGACCCGAAATGCAAAAATCCAAGAATATCTATATCGCCATGTAGCATCGAGCAGCATACCAAAACAACTTCACTGCCTTGACTTGAGGCTGGCCAGCGAGCACACCAACAACGCGGCAGCACGGCTTCAGCTACCCTCTGCAGAATTAGTCCCTGCCCTGGTTGACAATTCCTACTTCCACTTTGTCCTTGCCTCAGACAATGTTCTGGCTGCTTCGGTTGTTGCAGCATCGCTTGTCCGCAACTGTTTGCGGCCCCAGAAAGTTGTTCTGCACATAATTACAGATAAAAAGACTTATTATCCCATGCAGGCATGGTTCTCCTTGCACCCTTTATCACCTGCTATAATTGAAGTCAAAGCATTGCATCATTTCGATTGGTTTACAAAGGGTAAGGTGCCTGTGCTGGAAGCAATGGAGAAAGACCAGAAGGTGCGATCACAGTTTAGAGGAGGATCATCAGCTATAGTAGCAAATACCACTGAGAAGCCACAAGTTATTGCAGCAAAGCTACAAACACTTAGTCCCAAGTATAATTCAGTGATGAACCATATCCGAATACATCTTCCAGAGTTGTTTCCAAGCCTTAACAAGGTGGTCTTCCTCGACGATGACATAGTAATACAAACTGATCTTACGCCTCTGTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGTACTGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTCTCTCACCCTCTCATATTGAAAAACTTCAATCCGAACGAGTGCGCCTGGGCTTATGGAATGAACATTTTTGACTTGGAGGCTTGGAGGAAAACCAATATAAGCTTTACATACCACCATTGGGTTGAGCAGAATATAAAATCAGACCTGAGCCTGTGGCAGCTAGGCACATTACCTCCTGGGTTGATTGCATTTCATGGCCATGTTCACATTATTGATCCTTTCTGGCATATGCTGGGATTGGGATATCAAGAAGACACAAGTTTTGCTGATGCTGAGAGTGCCGGTGTCATCCATTTCAATGGCAGGGCGAAGCCATGGCTAGACATAGCTTTTCCACAACTGAGGCCATTGTGGACTAAATATGTTAACTTTTCAGATAAATTCATCAAGAGCTGTCACATTAAGGCATCATAG 1605 0.4336 MQLHISPSLRHVTVLPGKGLKEFIKVKVASRRVSYRMLFYSLLFFTFLLRFVFVLTSVDGIDGGETKCSTIGCLGKKLGPKLMGKKTESNVPDVIYQTLDAPLDKDELRGRSDIPQTLEEFMTEVKKGGFDAKTFAVKLREMVTLMEQRTRNAKIQEYLYRHVASSSIPKQLHCLDLRLASEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVAASLVRNCLRPQKVVLHIITDKKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTTEKPQVIAAKLQTLSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLTPLWDIDMNGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLILKNFNPNECAWAYGMNIFDLEAWRKTNISFTYHHWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQEDTSFADAESAGVIHFNGRAKPWLDIAFPQLRPLWTKYVNFSDKFIKSCHIKAS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01850 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 532 IPR029993 GO:0047262
Adu08g01850 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 209 531 IPR029044 -
Adu08g01850 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 210 528 IPR029044 -
Adu08g01850 534 CDD GT8_like_1 208 520 - -
Adu08g01850 534 Pfam Glycosyl transferase family 8 211 507 IPR002495 GO:0016757
Adu08g01850 534 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01850 Adu-Chr8 30467485 30470991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01850 1 534 Glycosyltransferase AT5G54690 80.561 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01850 K20867 - gmx:100812550 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01850 08 30467485 30470991 Adu08g01850 08 30467485 30470991 ECH