Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01847 ATGGCGAAGGTTTTTGGTTTGGGGAGTGAGCCAGTGGTGGGTTCACTAACTCCATCGAAGAAGAGAGATTACAGAGTCACCAACCGCCTCCAAGAGGGTAAACGCCCTCTATACGCCGTCGTTTTCAACTTCATCGATTCCCGCTACCTGAACGTTTTTGCCACTGTTGGCGGCAATAGGATTACGGTTTATCAGTGTCTTGAAGGAGGAGTTATTGCTGTTTTGCAATCTTATGTTGATGAGGATAAGGATGAATCCTTTTACACAGTGAGCTGGGCAAGCAATGTTGATGGTGCCCCATTTCTGGTGGCTGGAGGAATTAATGGCGTAATCCGAGTCATAGATACTGGTTCTGAGAGGATATACAAGGTATACCACACCTTTCATGGGACCCAAGCATTGAAGTCATCGCTTGTGATCTCTGCAAGCAAAGATGAATCTGTCCGGTTATGGAATGTTCATACTGGAATATGCATTCTGATATTTGCCGGGGCTGGAGGGCATCGTAATGAAGTTTTGAGCGTTGACTTTCATCCATCAGATATATACAAAATTGCTAGCTGTGGCATGGATAACACTGTAAAGATATGGTCGATGAAGGAGTTCTGGACCTACGTGGAAAAGTCATTCACATGGACAGATCTTCCATCTAAGTTTCCCACAAAATATGTGCAGTTTCCTGTATTCAATGCTTCAGTTCATTCAAATTATGTCGACTGTAATAGGTGGCTGGGTGATTTTATCCTCTCAAAGAGTGTTGACAATGAAATTGTCTTGTGGGAGCCTAAAGTGAAGGAACAAACTCCAGGAGAGGGTGTAGTTGACATTCTCCAGAAATACCCTGTTCCTGAGTGTGATATCTGGTTCATCAAGTTTTCTTGTGATTTCCATTACAATCAAGCTGCAATAGGTAACAGGGAAGGGAAGATTTTTGTTTGGGAATTGCAGTCAAGTCCACCAGTTCTTATCGCAAGGTTGTCGCATCCTCAATCGAAATCTCCAATCCGGCAAACTGCCGTGTCTTTTGATGGAAGTATTATTTTGAGTTGCTGTGAGGACGGCACGATATGGCGCTGGGACGATGTTACAAACGTGCCACCAGCTTAG 1107 0.4408 MAKVFGLGSEPVVGSLTPSKKRDYRVTNRLQEGKRPLYAVVFNFIDSRYLNVFATVGGNRITVYQCLEGGVIAVLQSYVDEDKDESFYTVSWASNVDGAPFLVAGGINGVIRVIDTGSERIYKVYHTFHGTQALKSSLVISASKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFHPSDIYKIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFNASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKVKEQTPGEGVVDILQKYPVPECDIWFIKFSCDFHYNQAAIGNREGKIFVWELQSSPPVLIARLSHPQSKSPIRQTAVSFDGSIILSCCEDGTIWRWDDVTNVPPA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01847 368 ProSiteProfiles Trp-Asp (WD) repeats profile. 165 200 IPR001680 GO:0005515
Adu08g01847 368 SMART WD40_4 224 261 IPR001680 GO:0005515
Adu08g01847 368 SMART WD40_4 319 360 IPR001680 GO:0005515
Adu08g01847 368 SMART WD40_4 68 115 IPR001680 GO:0005515
Adu08g01847 368 SMART WD40_4 273 314 IPR001680 GO:0005515
Adu08g01847 368 SMART WD40_4 117 152 IPR001680 GO:0005515
Adu08g01847 368 SMART WD40_4 155 198 IPR001680 GO:0005515
Adu08g01847 368 PRINTS G protein beta WD-40 repeat signature 139 153 IPR020472 -
Adu08g01847 368 PRINTS G protein beta WD-40 repeat signature 185 199 IPR020472 -
Adu08g01847 368 PRINTS G protein beta WD-40 repeat signature 248 262 IPR020472 -
Adu08g01847 368 ProSiteProfiles Trp-Asp (WD) repeats profile. 136 161 IPR001680 GO:0005515
Adu08g01847 368 Gene3D - 20 363 IPR015943 GO:0005515
Adu08g01847 368 SUPERFAMILY WD40 repeat-like 28 360 IPR036322 GO:0005515
Adu08g01847 368 PANTHER POLYCOMB GROUP PROTEIN FIE1 6 363 - -
Adu08g01847 368 Pfam WD domain, G-beta repeat 166 198 IPR001680 GO:0005515
Adu08g01847 368 Pfam WD domain, G-beta repeat 333 360 IPR001680 GO:0005515
Adu08g01847 368 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 165 200 - -
Adu08g01847 368 PANTHER POLYCOMB PROTEIN 6 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01847 Adu-Chr8 30398128 30401060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01847 K11462 - gmx:100795288 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01847 08 30398128 30401060 Adu08g01847 08 30398128 30401060 ECH