Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01833 ATGACCAAGTCTCTCTCCCATCTTAGACCCGGTAAAACACTGAGTCCAAGAAAATGGCATGCTGCTTTTACTGAAGAAGGATATCTGGATATAGGAAAGATTCTAAGGCGAATCTACAGAGGGGGAATCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTCTACTTGGTTGTTATGATCCAAAGAGTACATTTGATGAACGAGAACAAATAAGACAGCGTCGAAGGTTAGAATATGCTAGATGGAAGGAAGAATGTCGCCAAATGTTTCCTTTTGTTGGAAGTGGTAGATATATTTCATCTCCTGTAATTACCGATGATGGTCAACCGATTCAAGATCCATCAGTTCTGCTGGAATCAAATCCAGACAAGGGATTGGTTTTAGTTCCTCAAGACAATTATAGGTCTTCAAGCATAGATGCCAGAAATAATTTAGAAAAGGTGACAGACAAGAGAGTAATCCAGTGGCTGTTAACTCTTCATCAAATAGGTCTTGACGTGATTCGCACTGATAGGACATTGGTCTTTTACGAGAAGCAAGAGAACTTGTCAAAATTATGGGATATTCTTGCAGTTTATGCTTGGCTAGATAAAGATGTTGGCTATGGTCAAGGGATGAGTGACCTATGCTCACCTATGATAATTCTTCTTGAGGATGAAGCAGATGCATTTTGGTGCTTTGAGCGTCTAATGCGCAGACTTCGAGGTAATTTCAAGTGCACTGATCGTTCTGTTGGAGTGGAGACTCAACTAAGTAACTTGGCTTCAATTACTCAAGTATTAGATCCAAAACTTCATAAACATTTAGAGCAACTAGGTGGAGGTGATTATCTGTTTGCTTTTCGGATGCTAATGGTTCAGTTTCGTCGAGAATTCTCCTTTTGTGATTCACTATACCTTTGGGAGATGATGTGGGCTCTAGAGTATGATCCTGATTTGTTTTGGATGTACGAGGATGCTCGGAGAGCTCCTACAAGCGCCGAGAGCTCTAGAGGGAAGGTGAAGTCAATTAGACAATGTGGAAAGTATGAGCGAGAAAATATGAGAACAGGGGCAAAGAACTCCGAAACTCCTCTTCCTATATCAATTTTCCTTGCTGCTAGTGTGTTGAAAGATAAAAGTTCAAAGCTACTACATGAAGCACGGGGTCTGGATGATGTTGTCAAGATTTTGAATGACATGACTGGAAATCTAGATGCTAAAAAGGCTTGTTCCGGGGCTATGAAACTTCATAAAAAATATTTGAGAAAGGCCAAGAAAACGTAA 1266 0.4036 MTKSLSHLRPGKTLSPRKWHAAFTEEGYLDIGKILRRIYRGGIHPSIRGEVWEFLLGCYDPKSTFDEREQIRQRRRLEYARWKEECRQMFPFVGSGRYISSPVITDDGQPIQDPSVLLESNPDKGLVLVPQDNYRSSSIDARNNLEKVTDKRVIQWLLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWLDKDVGYGQGMSDLCSPMIILLEDEADAFWCFERLMRRLRGNFKCTDRSVGVETQLSNLASITQVLDPKLHKHLEQLGGGDYLFAFRMLMVQFRREFSFCDSLYLWEMMWALEYDPDLFWMYEDARRAPTSAESSRGKVKSIRQCGKYERENMRTGAKNSETPLPISIFLAASVLKDKSSKLLHEARGLDDVVKILNDMTGNLDAKKACSGAMKLHKKYLRKAKKT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01833 421 Pfam Rab-GTPase-TBC domain 138 306 IPR000195 -
Adu08g01833 421 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 18 268 IPR035969 -
Adu08g01833 421 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 9 420 - -
Adu08g01833 421 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 9 420 - -
Adu08g01833 421 Gene3D - 244 421 - -
Adu08g01833 421 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 139 238 - -
Adu08g01833 421 SMART tbc_4 39 331 IPR000195 -
Adu08g01833 421 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 246 414 IPR035969 -
Adu08g01833 421 ProSiteProfiles TBC/rab GAP domain profile. 42 308 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01833 Adu-Chr8 30176776 30181876 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01833 - - adu:107462412 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01833 08 30176776 30181876 Adu08g01833 08 30176776 30181876 ECH