Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01830 ATGATTTCCTCAAGCAAACTCAAATCCGTTGATTTCTACAGAAAAATCCCTAGAGATTTAACTGAGGCATCACTATCTGGAGCGGGGTTATCCATAGTAGCAGCTCTCTCCATGATCTTTTTATTTGGAATGGAACTCAGTAATTATTTGTCTTTCAGCACCACTACATCTGTGATTGTTGACAAGAGTTCTGACGGGGAGTTTTTACGTATAGATTTCAATATCAGTTTTCCTGCACTTTCATGCGAGTTTGCATCGGTTGATGTGAGTGACGTGCTGGGAACAAACAGACTGAATATAACAAAAACAGTTCGCAAGTTTTCTATTGATACAAATTTAAGACCCACTGGGGCTGAATTTCATTCAGGGACAACTGCAAACATCATTAAACATGATGAGCAAGTAGAGGAAGAATCAGTTGAAGGTTCTCTTACACTTACATCACGCAATTTTGATAAATATTCTCGTCTGTTTCCAATTACAGTTGTGAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAAACCTTCATGGGAGAAAGCAGCTAAAATAATAAAAGAGAGATATGATCCAGAGATCGATGGCCGTATTGTTTTGGGGAAGGTAGATTGCACAGAAGAAGGAGATTTATGCCGGAGCCATCACATACAAGGGTATCCATCAATTCGTATCTTCCGTAAAGGAAGTGATATCAGAGATGACCATGGAGATCATGATCATGAGTCCTATTATGGAGATCGTGATACAGATAGCCTAGTCAAGACAATGGAGAAGTTAGTGGCTTCTCTCCCTGCAGAATCTCAGAAGCTAGGTTTGGAGGATAAATCCAATGGAACAGAGTACAGAAAAAGACCCGCACCTTTAGCTGGGGGATGTAGAATTGAAGGATATGTGCGTGTCAAAAAGGTTCCAGGAGATTTGGTTATATCAGCTAGATCTGATGCCCATTCTTTCGATGCTTCTCAAATGAACATGTCACATGTCGTACACCATCTATCTTTTGGACGGAAATTGTCACCTAGGGTTTTGAGTGATGTGAAGCGCTTGATACCTTATGTTGGTAGCAGCCATGAAAGGTTGAATGGTCGGTCATTCATCAATACACGTGATTTAGGAGCAAATGTTACTATGGAGCATTACCTCCAGATAGTTAAAACAGAGGTGATTACTGGAAAAGATTATAAATTAGTTGAGGAGTATGAATACACAGCACACAGCAGTGTAGCACAGAGTTTACACATTCCTGTGGCAAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAGTAACAGAAAACCAGAAATCTTTTTCACATTTTATAACAAATGTCTGTGCTATCATTGGGGGTATTTTCACGGTAGCTGGAATTTTGGACTCGATTCTGCACAACACTATTAGACTAATGAAAAAAGTTGAGCTTGGCAAAAACTTCTGA 1443 0.3999 MISSSKLKSVDFYRKIPRDLTEASLSGAGLSIVAALSMIFLFGMELSNYLSFSTTTSVIVDKSSDGEFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDTNLRPTGAEFHSGTTANIIKHDEQVEEESVEGSLTLTSRNFDKYSRLFPITVVNFYAPWCYWSQRLKPSWEKAAKIIKERYDPEIDGRIVLGKVDCTEEGDLCRSHHIQGYPSIRIFRKGSDIRDDHGDHDHESYYGDRDTDSLVKTMEKLVASLPAESQKLGLEDKSNGTEYRKRPAPLAGGCRIEGYVRVKKVPGDLVISARSDAHSFDASQMNMSHVVHHLSFGRKLSPRVLSDVKRLIPYVGSSHERLNGRSFINTRDLGANVTMEHYLQIVKTEVITGKDYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLVTENQKSFSHFITNVCAIIGGIFTVAGILDSILHNTIRLMKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01830 480 Pfam Endoplasmic reticulum vesicle transporter 291 461 IPR012936 -
Adu08g01830 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Adu08g01830 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Adu08g01830 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Adu08g01830 480 Pfam Thioredoxin 145 242 IPR013766 -
Adu08g01830 480 ProSiteProfiles Thioredoxin domain profile. 126 263 IPR013766 -
Adu08g01830 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Adu08g01830 480 CDD PDI_a_family 144 258 - -
Adu08g01830 480 Gene3D Glutaredoxin 126 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01830 Adu-Chr8 30152810 30159581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01830 - - gmx:100806869 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01830 08 30152810 30159581 Adu08g01830 08 30152810 30159581 ECH