Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01652 ATGGATAAACATGAACCTGAAACAGTTAGAAGCACTAGCAGTTATGTCAACAATGGCAACATCAATGATCATGAAGGCGACATGATTAGGTGGTTCGAGGAAGTGTCCGCGAAGGCCGGTGCGGTCCAAACGGAGGTGCTATGCCGGATCCTGAAAGAGAATTTCAAGGTGGAATATCTGAAGAAATGGTTATTAGTAGGGAAGGAAGAGATTAATATGGCAGAGATGGATGCATGTTGTTTTATGTTGTCTCATGGAGTATATAGTTCCGGAACCACAGAAGGAAGGCAGAAATTTGTTCCATTCACGAGGCACAGTGCACAAACAACCCTTGAAACTTTCACTTTATCTGCAGCATATAGGTCAAGGGTTTATCCAATAAGGGAAGGAGGTAAGATTCTTGAATTCATATACAGCGGCAACCAATTCAAAACAAAAGGAGGGTTAATTGCAGGAACCGCCACAACACACTACTATGCAAGTGAGGAGTTCAGGATCAAACAGGAGAGAACTAAGTCATTCACTTGCAGCCCCTATGAGGTTATCTCCGCCGGTGACTACAAGCAATCCACCTACTGCCACCTCCTCCTCGGCCTCTTCTTCTCTCATGATGTCGAATTCATCACCTCTGCCTTCGTCTATGGCATCGTCCAAGCCTTTCGCAGCTTCGAAGAGCTCTGGAGAGACTTGTGCAATGACATTAGACACGGCACCTTAAGTTCTAGAATAAAGGTACCAAAAATGAGAGAGGCGGTGTTGGAAATCATAACAGCAAACCAAAGTTTGGCATCAAGAATAGAAGGGATATGCGAGGAGGTAGAAGTGATGGATTGGTTTGGTTTGATTCCAAAGTTATGGCCAAATGCAAAGTACGTGTATTCCATAATGACAGGTTCAATGCAACCATATTTGAAGAGGCTAAGGCACTATGCAAATGGGTTACCATTGGTGAGTGGTGACTATGGTTCAAGTGAGAGCTGGATTGGGGTTAATGTGGATCCAAGTTCACCACCAGAGAGTGTCACATTTGCTGTGGTTCCAACTTTCTCTTACTTTGAGTTCATACCACTTTACAGACACAAACATAGTTGCGGTTCCTCTCATGATGCTGCTGCTGATGATGATTTCGTTGAAGACAAGCCAATCCCACTATCTAAGGTTAAAGTTGGACAAGAGTACGAAATTGCACTCACCACTTTCACTGGACTGTACAGGTGCAGATTGGGAGATGTAGTAGAAGTTGGTGGATTCCACAATGGGACTCCAAAACTTAACTTCATATGCAGAAGGAAACTGATCCTAACAGTGAACATAGACAAGAACACAGAGAAGGACCTCCAAGCAGTAGTGGAGAAAGCCTCTTACATCCTCCAATCACAAACAAACAACAACGCCGAGCTTGTTGACTTCACAAGCTACGCCGACCTAACAACCCAACCCGGCTGCTACGTCATTTTCTGGGAGATCAAAGGAGACGCACACGACCATGTGCTTCAATCTTGTTCCACTGAAATGGACGCTGCCTTTGTTGACTATGGCTACGTGGTTTCCAGGAAAACAAGCTCCATAGGGCCATTGGAGCTTTGCATTGTGGAGAAGGGTACGTTTAAGAAGATTCTGGATTGTTTTGTTGCAAATGGTGCCACTTTGGGACAGTTCAAGACTCCTAGGTGCACCAATAACCCTCTCTTGCTCAACATTCTTCATGCATGCACCCTTAAGATTTTTCGCAGCACTGCTTATGCTTAA 1749 0.4454 MDKHEPETVRSTSSYVNNGNINDHEGDMIRWFEEVSAKAGAVQTEVLCRILKENFKVEYLKKWLLVGKEEINMAEMDACCFMLSHGVYSSGTTEGRQKFVPFTRHSAQTTLETFTLSAAYRSRVYPIREGGKILEFIYSGNQFKTKGGLIAGTATTHYYASEEFRIKQERTKSFTCSPYEVISAGDYKQSTYCHLLLGLFFSHDVEFITSAFVYGIVQAFRSFEELWRDLCNDIRHGTLSSRIKVPKMREAVLEIITANQSLASRIEGICEEVEVMDWFGLIPKLWPNAKYVYSIMTGSMQPYLKRLRHYANGLPLVSGDYGSSESWIGVNVDPSSPPESVTFAVVPTFSYFEFIPLYRHKHSCGSSHDAAADDDFVEDKPIPLSKVKVGQEYEIALTTFTGLYRCRLGDVVEVGGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQAVVEKASYILQSQTNNNAELVDFTSYADLTTQPGCYVIFWEIKGDAHDHVLQSCSTEMDAAFVDYGYVVSRKTSSIGPLELCIVEKGTFKKILDCFVANGATLGQFKTPRCTNNPLLLNILHACTLKIFRSTAYA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01652 582 Pfam GH3 auxin-responsive promoter 88 561 IPR004993 -
Adu08g01652 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 23 77 IPR004993 -
Adu08g01652 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 88 581 IPR004993 -
Adu08g01652 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 23 77 - -
Adu08g01652 582 MobiDBLite consensus disorder prediction 1 21 - -
Adu08g01652 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 88 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01652 Adu-Chr8 27346964 27354357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01652 19 579 EF-hand Containing Proteins AT1G23160 32.943 7.29e-98 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01652 K14487 - gmx:100814683 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01652 08 27346964 27354357 Adu08g01652 08 27346964 27354357 ECH
Adu08g01652 08 27346964 27354357 Adu03g01373 03 20208544 20216402 PCT