Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01643 ATGAGGCGAAGAGGTGCGGATTTTCGGAGGCCGGTGAGGAGGAGGATTCCTGATGCGTTGTGGTGGGCATTGTGCTGTGGAGTGGTTATCCTCTTTGTCTATATTCTCAGCAAAGGGAACCAGATTGAGTCAAGACCAGCTTTGGCACAGATATCCCTAGCAAAAGCTTTTGTCGTGATTGCAAAAGAAAGTAACAATTTACAATTTGCTTGGGAATTAAGTGCCCAGATCCGCAATTCACAAATTCTCCTCTCGAACGCTGCCACTAGGCGAGTTCCTCTATCAACTAGAGAATCTGAAAGTGCTATCCGTGATATGGCATTATTGTTATACCAGGCTCAGCAGCTCCATTATGACAGTGCAACCATGATCATGCGATTCAAAGCAAAAATTCAAGCGCTTGAAGAACAGATGAATTCTGTGACTGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAGGTCCCGAAAAGCCTATACTGTCTTGGTGTTCGGTTGACAACTGAATGGTTCAAAAACCTTAATCTGCAAAATAAATTGAGGGACAAAAGACAAGTCGAGATGAAACTTAAGGATAACAATCTTTTTCATTTTTGTGTCTTTTCTGACAATATTCTCGCAACTTCAGTTGTTGTCAATTCAACATCGATAAGCTCTAAGAATCCTGATATGATTGTTTTCCACCTTGTAACTGATGAAATAAATTTTGCGGCAATGAAGGCATGGTTTGCCATGAATGATTTCCGTGGGGTGACTGTGGAAGTTCAAAAGTTTGAAGACTTCATTTGGTTAAATGCTTCATATGTTCCTGTGCTTAAGCAACTTCAAGACACAGAAACACAGAGCTATTACTTTTCTGGCAACAGTGGCGATGGCAGGACACCGATCAAGTTCCGTAACCCTAAATATCTATCCATGCTTAACCATCTGAGGTTTTATATACCTGAGGTATTTCCTGCACTAAAGAAGGTGGTGTTCTTGGATGATGATGTTGTAGTTCAAAAGGATCTTTCTGGTCTTTTCTCCCTTGACTTGAAGGGCAACGTCAATGGGGCTGTGGAAACATGCATGGAGACATTTCATAGATATCACAAATATCTAAACTACTCCCATCCTCTGATTCATACACATTTTGATCCTGATGCTTGTGGATGGGCATTCGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAAGAATGTTACCGGCATCTACCATTATTGGCAGGAAAAGAATGTCGACCGGACATTGTGGAAACTTGGAACCTTGCCCCCTGGACTGTTGACTTTCTATGGATTAACGGAACCCTTGGATCCATCATGGCATGTATTGGGTTTTGGCTACACAACCGTTGATCCTCAGTTGATAGAGAGAGGCGCTGTACTTCATTTCAATGGGAACTCCAAACCATGGTTGAAGATCGGCATTGAGAAGTACAAGCCCCTTTGGGAAAAATTTGTTGACTACTCTCATCCTTTGTTGCAACAATGCAATTTCCATTGA 1509 0.4162 MRRRGADFRRPVRRRIPDALWWALCCGVVILFVYILSKGNQIESRPALAQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAATRRVPLSTRESESAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVTEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNLNLQNKLRDKRQVEMKLKDNNLFHFCVFSDNILATSVVVNSTSISSKNPDMIVFHLVTDEINFAAMKAWFAMNDFRGVTVEVQKFEDFIWLNASYVPVLKQLQDTETQSYYFSGNSGDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSGLFSLDLKGNVNGAVETCMETFHRYHKYLNYSHPLIHTHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTTVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKFVDYSHPLLQQCNFH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01643 502 SUPERFAMILY Nucleotide-diphospho-sugar transferases 198 500 IPR029044 -
Adu08g01643 502 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 199 494 IPR029044 -
Adu08g01643 502 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 44 502 IPR029993 GO:0047262
Adu08g01643 502 Pfam Glycosyl transferase family 8 203 476 IPR002495 GO:0016757
Adu08g01643 502 Coils Coil 124 144 - -
Adu08g01643 502 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 44 502 - -
Adu08g01643 502 CDD GT8_like_1 197 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01643 Adu-Chr8 27195909 27198407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01643 1 502 Glycosyltransferase AT2G20810 75.746 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01643 K13648 - gmx:100792018 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01643 08 27195909 27198407 Adu08g01643 08 27195909 27198407 ECH
Adu08g01643 08 27195909 27198407 Adu03g01350 03 19865863 19868483 PCT