Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01602 ATGTCTAGTCTCTTGGGATTCTTTGTGGGTCTAGTTTTGGTGGGGGTTGTTGCCTCTTCCAAGTTTGAAGAACTCTACCAACCTGCTTGGGCCTTGGATCATTTCATCCACGATGGCGAACTCATTAAACTCAAGCTTGATAACTATTCAGGTGCTGGTTTTGGATCAAAGAGCAAATATATGTTTGGGAAAGTGAGCATCCAACTTAAGCTTGTGGAGGGTGACTCTGCTGGAACCGTTACTGCTTTCTATATGTCATCGGAGGGTCCAAATCACAACGAATTTGATTTTGAGTTCTTGGGGAACACTACTGGTGAGCCTTATTCGGTGCAGACGAATGTGTATGTGAATGGTGTTGGTAACAGGGAGCAGAGACTCGACCTATGGTTCGATCCCACCAAGGACTTCCACACCTACTCTATCTTCTGGAATCAACGCCAAGTTGTGTTCCTAGTGGACGATACGCCAATAAGGGTGCACACAAACCTTGAACACAAGGGAATCCCTTTCCCTAAAGACCAAGCAATGGGAGTGTACAGCTCAATATGGAACGCAGATGATTGGGCCACACAGGGTGGTAGGGTGAAGACAGATTGGAGCCATGCACCATTCGTTGCCACATACAAGGACTTCACGATTGACGCGTGTGAGTGCCCAGTGGGAGTGTCATCGTCATCAGTGGCCCCGGAAAATGCTAAGAGGTGCAGTAGCAGCGAGGATAAGAAGTATTGGTGGGATGAACCAACTATGTCGGAGTTGAACGTTCACCAGAGCCACCAGCTTATGTGGGTTAGGGCTAACCATATGGTCTATGACTATTGCACTGATACTGCTAGGTTCCCAGTCACACCCGCTGAGTGTGTCCACCACCGCCACTAA 879 0.4812 MSSLLGFFVGLVLVGVVASSKFEELYQPAWALDHFIHDGELIKLKLDNYSGAGFGSKSKYMFGKVSIQLKLVEGDSAGTVTAFYMSSEGPNHNEFDFEFLGNTTGEPYSVQTNVYVNGVGNREQRLDLWFDPTKDFHTYSIFWNQRQVVFLVDDTPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVATYKDFTIDACECPVGVSSSSVAPENAKRCSSSEDKKYWWDEPTMSELNVHQSHQLMWVRANHMVYDYCTDTARFPVTPAECVHHRH 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01602 292 CDD GH16_XET 18 287 IPR016455 GO:0010411|GO:0016762|GO:0042546
Adu08g01602 292 Pfam Glycosyl hydrolases family 16 25 200 IPR000757 GO:0004553|GO:0005975
Adu08g01602 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 17 290 IPR044791 GO:0004553
Adu08g01602 292 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 291 IPR013320 -
Adu08g01602 292 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 2 208 IPR000757 GO:0004553|GO:0005975
Adu08g01602 292 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 240 287 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Adu08g01602 292 Gene3D - 11 292 - -
Adu08g01602 292 PIRSF EndGlu_transf 1 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Adu08g01602 292 PRINTS Glycosyl hydrolase family 16 signature 110 123 IPR008264 GO:0004553|GO:0005975
Adu08g01602 292 PRINTS Glycosyl hydrolase family 16 signature 128 145 IPR008264 GO:0004553|GO:0005975
Adu08g01602 292 PRINTS Glycosyl hydrolase family 16 signature 52 70 IPR008264 GO:0004553|GO:0005975
Adu08g01602 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01602 Adu-Chr8 26515888 26517482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01602 52 292 Glycoside Hydrolase AT4G03210 76.763 3.05e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01602 K08235 - gmx:100801567 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01279 03 17852002 17854586 Adu08g01602 08 26515888 26517482 PCT