Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01526 ATGGATTTCACCCATCTGCTTCTTCTTCTCTTCTTCTTATTCTTTGGTGTGGGATTCTCGGAGAACACGAATCCGAGGTTGCTGGCGTCACCATCATTGTTATCAACGACTCAGATAAACTCGAACTCGATCCTTGTGGCTCTTCTGGACTCCCATTACACAGAGCTCGCGGAGCTCATAGAAAAAGCCATGCTCCTTCAAACACTCGAAGAAGCCGTAGCCACACACAACATCACAATCTTCGCACCCACCAACCAAGCCTTAGAATCAAACCTTGATTCTTTCTTCAAACGCTTCCTTCTCGAACCAGCTAATCTCCATTCCCTCCAAGCCCTCATTCTCTTCCACATCCTCCCAACCCGAATTTCATCCCAATATAGATTCGGGTCGACCCGATTCAACACGCTATCGTCCGAACCCATTCGCCTTCAGACGAATTCCACATCCAAAGAATGGACAGTCGATCGGGTCAAGATAACCCGTCCCGATGATGTTACCCGGCCCGATGGTATCATCCATGGGGTTAACGGCCTTCTCATTCCACGTTCCGTACAAGATTACTTCAACCGCCGCCGCAGTCTTCGCTCGATTGCCGCCGTGAAACCCGAGCCAGCTCCCGAAATCGATCCGAGAACCAACCGGGTTAAGAAGCTCGACCCGAAAGAAAAGCCTCCGGGCTCAAAACCCTCACTCCCGATCTATGAGGCGCTGGCACCGGGACCGTCACTAGCTCCGGCGTCGGCACCGGCACCTGGAGGCCACCACGGGCACTTCGACGGTGAGTCTCAGGTGAGGGACTTCATCCACACGCTAATCCACTACGGAGGGTACAACGAGATGGCGGACATTCTCGTAAACCTAACGTCACTGGCCACGGAGATGGGACGCTTGGTGTCAGAGGGTTACGTCCTCACCGTCCTTGCGCCGAACGACGAGGCTATGGCCAAGCTTACGACGGAGCAACTCAGTGAACCGGGGGCACCGGAGCAGATAATGTACTACCATCTGATACCGGAGTACCAAACAGAAGAGAGCATGTACAATGCTGTTAGAAGGTTCGGGAAGGTTAGGTACGATACGCTGCGGTTGCCGCATAAGGTGGTGGCGGTGGAGGCTGATGGTTCGGTGCGGTTCGGAAAAGGTGGCGGTTCGGCTTATTTGTTCGATCCTGATATATATACCGATGGAAGAATCTCTGTTCAGGGGATTGACGGGGTTTTGTTTCCGATGGAAGAAGGAGAGGAGACGGTGACGGGTCGGGTCAAGAACGGGAATCGGACGGGTCAACCCGTTAAGGTCGTTGTCAAGCATAGAAGAGGAAAATTGCTTGAAGCAGCATGCTGGATGCTTGGAACCGTCCGTCAACATTCTAGATTCACCTCTTGTCAATGA 1392 0.5273 MDFTHLLLLLFFLFFGVGFSENTNPRLLASPSLLSTTQINSNSILVALLDSHYTELAELIEKAMLLQTLEEAVATHNITIFAPTNQALESNLDSFFKRFLLEPANLHSLQALILFHILPTRISSQYRFGSTRFNTLSSEPIRLQTNSTSKEWTVDRVKITRPDDVTRPDGIIHGVNGLLIPRSVQDYFNRRRSLRSIAAVKPEPAPEIDPRTNRVKKLDPKEKPPGSKPSLPIYEALAPGPSLAPASAPAPGGHHGHFDGESQVRDFIHTLIHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAVEADGSVRFGKGGGSAYLFDPDIYTDGRISVQGIDGVLFPMEEGEETVTGRVKNGNRTGQPVKVVVKHRRGKLLEAACWMLGTVRQHSRFTSCQ 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01526 463 Gene3D FAS1 domain 283 409 IPR036378 -
Adu08g01526 463 SUPERFAMILY FAS1 domain 42 182 IPR036378 -
Adu08g01526 463 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 30 463 IPR044654 -
Adu08g01526 463 SMART fasc_3 305 410 IPR000782 -
Adu08g01526 463 SMART fasc_3 79 182 IPR000782 -
Adu08g01526 463 MobiDBLite consensus disorder prediction 201 255 - -
Adu08g01526 463 ProSiteProfiles FAS1/BIgH3 domain profile. 264 392 IPR000782 -
Adu08g01526 463 MobiDBLite consensus disorder prediction 207 224 - -
Adu08g01526 463 ProSiteProfiles FAS1/BIgH3 domain profile. 40 179 IPR000782 -
Adu08g01526 463 Gene3D FAS1 domain 44 182 IPR036378 -
Adu08g01526 463 SUPERFAMILY FAS1 domain 243 410 IPR036378 -
Adu08g01526 463 Pfam Fasciclin domain 52 181 IPR000782 -
Adu08g01526 463 Pfam Fasciclin domain 299 409 IPR000782 -
Adu08g01526 463 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 30 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01526 Adu-Chr8 25431223 25434006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01526 - - gmx:100782264 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01526 08 25431223 25434006 Adu03g01135 03 12578949 12582012 PCT