Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01409 ATGGCTTCCTCGAGAGTGGATCTAGATGGGAACCCAATAAAGCCCATAACGATTTGCATGATCGGTGCCGGAGGTTTCATAGGCTCCCACCTCTGCGAGAAGCTCATGACGGAGACGCCGCACACGGTGCTCGCTTTGGACGTTTACAACGACAAGATCAAGCACCTCTTGGAGCCTGAAACCAATCCATGGCATGGTAGAATCAACTTCCACCGCCTCAACATCAAGCACGATTCGAGGCTCGAAGGTCTTATCAAAATGGCAGATCTGACGATTAATTTGGCTGCTATATGCACTCCTGCGGATTACAACACGCGCCCTCTGGACACCATTTATAGCAACTTCATCGATGCACTACCAGTGGTGAAGTACTGTTCTGAAAACAACAAGCGTCTCATTCATTTTTCGACCTGTGAAGTGTATGGGAAAACCATTGGGAGCTTTCTCCCTAAGGATAGCCCGCTTCGTAAGGATCCTGCATACTATGTACTTAAAGAAGATGAGTCTCCATGCATTTTTGGTTCCATTGAAAAACAGAGATGGTCTTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGTTTGGAGTTCACAATTGTGCGACCTTTTAATTGGATTGGACCACGAATGGATTTCATTCCCGGCATTGATGGTCCAAGTGAAGGTGTTCCTCGTGTTCTGGCATGCTTTAGCAATAATCTCCTGAGGAAAGAGCCCCTAAAGCTTGTGGATGGTGGTCAATCCCAAAGGACCTTTGTTTATATTAAGGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCTAGGGCTAATGGACACATCTTTAATGTTGGTAACCCAAACAATGAGGTTACAGTTAGGCAGCTTGGGGAAATGATGGTTAAGGTTTACTCTAAGGTAAGTGGAGATCCACCTTTGGAAAATGCTACAGTTGATGTGAGCTCTAAAGAATTTTATGGTGAGGGATACGATGATAGCGACAAGCGAATTCCAGACATGACCATCATTAACAGACAGCTTGGATGGAACCCAAAAACCTCACTTTGGGACTTGCTTGAATCCACACTGACCTATCAGCACAGGACCTATGCTGAAGCCATTAAGAAAGTGATTGCTAAACCTGTTGCAAGTTAA 1164 0.4493 MASSRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMTETPHTVLALDVYNDKIKHLLEPETNPWHGRINFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRKEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLGEMMVKVYSKVSGDPPLENATVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01409 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 370 IPR036291 -
Adu08g01409 387 CDD Arna_like_SDR_e 17 372 IPR045869 GO:0016831
Adu08g01409 387 Gene3D - 16 378 - -
Adu08g01409 387 PANTHER - 4 386 - -
Adu08g01409 387 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 4 386 - -
Adu08g01409 387 Pfam NAD dependent epimerase/dehydratase family 18 288 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01409 Adu-Chr8 23802429 23805747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01409 16 382 Miscellaneous Gene Families AT1G02000 21.608 2.02e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01409 K12449 - gmx:100792879 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01409 08 23802429 23805747 Adu08g01409 08 23802429 23805747 ECH
Adu08g01409 08 23802429 23805747 Adu03g00063 03 593067 596276 PCT