Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01381 ATGCCATCATTGTTTTCCTCTTCTCTCCTTCAAATGCCTCCTCTTCTATTCTCTCTTATACTCTCACTCATGCTTTGTGGAATCATTGCTGATGAGTCTCCACCTTCACCTGGCTACTACCCTAGTTCCCAAGTTAGTTCTGTTGCCTTTGATCAAGCTTATAGAAACCTTTGGGGACCTCAGCACCAAAGACTAGACCAATCTGGCTCACTAACTATTTGGCTTGACTCTTACTCTGGAAGTGGATTCAAGTCAATCCGGCCGTATCGATCCGGATACTTTGGTGCTGCCATTAAGCTTCAATCTGGTTACACTGCAGGAGTGATTACATGTCTCTATCTTTCAAACAACCAAGACTACCCAGGAGACCATGATGAAGTGGACATTGAGTTCCTTGGTACCATCCCAGATAAGCAATATGTGCTGCAGACAAATGTGTTCATGCGAGGAAGCGGAGACAAGAATAATGTGATAGGAAGAGAGATGAGGTTTCACCTTTGGTTCGATCCAACACAAGATTTTCACCACTATGCTATTCTATGGACACCCACTGACATCATATTTTTGGTGGACGATGTTCCAATAAGGAATTACCCAAGAAAGAATGATGCAACATTCCCTGAAAGAGCAATGTACGTGTACGGATCGATATGGGACGCATCATCATGGGCCACAGAGAATGGGAAATACAAAGCTGATTACAAATACCAACCATTCATTGGAAGATACAAAGATTTCAAGCTCCAAGGTTGCACCACTCAATCCTCCTCCTCATGCCAGCCACCCTCACCTTCACCACCTGGCTACAATTCACTAAGCCCTCAACAGTATAATGCAATGCAATGGGTCCAAAACAATTACTTGGTCTATGACTATTGCCGTGATCCCACTAGAGACCATACCCTTACTCCAGAATGCTAA 921 0.4387 MPSLFSSSLLQMPPLLFSLILSLMLCGIIADESPPSPGYYPSSQVSSVAFDQAYRNLWGPQHQRLDQSGSLTIWLDSYSGSGFKSIRPYRSGYFGAAIKLQSGYTAGVITCLYLSNNQDYPGDHDEVDIEFLGTIPDKQYVLQTNVFMRGSGDKNNVIGREMRFHLWFDPTQDFHHYAILWTPTDIIFLVDDVPIRNYPRKNDATFPERAMYVYGSIWDASSWATENGKYKADYKYQPFIGRYKDFKLQGCTTQSSSSCQPPSPSPPGYNSLSPQQYNAMQWVQNNYLVYDYCRDPTRDHTLTPEC 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01381 306 Pfam Glycosyl hydrolases family 16 51 235 IPR000757 GO:0004553|GO:0005975
Adu08g01381 306 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 270 306 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Adu08g01381 306 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 15 306 IPR044791 GO:0004553
Adu08g01381 306 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 306 IPR013320 -
Adu08g01381 306 PIRSF EndGlu_transf 15 306 IPR016455 GO:0010411|GO:0016762|GO:0042546
Adu08g01381 306 Gene3D - 30 306 - -
Adu08g01381 306 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 29 243 IPR000757 GO:0004553|GO:0005975
Adu08g01381 306 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 15 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01381 Adu-Chr8 23442506 23444119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01381 19 306 Glycoside Hydrolase AT3G44990 66.441 4.19e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01381 K08235 - gmx:100796768 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01381 08 23442506 23444119 Adu08g01381 08 23442506 23444119 ECH
Adu08g01381 08 23442506 23444119 Adu03g00099 03 914452 916959 PCT