LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g01345	ATGAGTGAGATCACTTCACCTTCGCCGGAAATTCAATCCAATTCGAGTTCTGCTAGCTCCGATAACGACCCTGACCCTCCCATCCACCTCCGGTTGCCTCCCCTCTCGTACTCCCTCTTCGACGCTGAACCCTCCGAACCAAACGGCGTCGTTCACGGATCCGCTTCTTCTGAACCTCCAAAACCCTCGCAGTCGCACGAGGATGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTCTTTGTTCTCAGTCATTCTGGCAAACCTATATACTCTAGGTATGGGGATGAACACAAGCTTGCTGGGTTTTCAGCAACGTTGCAAGCTATCATTTCATTTGTGGAAAATGGGGGTGACCGTGTAAAATTGGTGAGGGCCGGAAATCATCAGGTGGTTTTTCTTGTGAAAGGGCCTATTTACTTAGTTTGCATTAGCTGCACAGAAGAGCCTTATGAGTCGTTAAGAGGGCAGTTGGAGCTTATCTATGGCCAGGTGATTGTTATACTGACAAAGTCAATAAACAGATGTTTTGAGAGGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACATCGTCTTCTCTTCACTAATTCATTCTTTTAATTGGAATCCGGCTACATTTCTTCATGCTTATACCTGTCTGCCCCTTACATATGCAACAAGGCAAGCTGCTGGTGCTATCTTGCAGGATGTTGTGGATTCAGGTGTTCTGTTTGCAATACTAATGTGCAGGCACAAGGTAATCAGTCTAGTTGGTGCACAGAAAGCCACACTTCATCCAGATGATATGCTACTGCTGGTCAACTTCATTATGTCAACAGAATCCTTTAGGACATCTGAATCATTTTCACCTGTTTGCTTGCCAAGATACAATCCTCTGGCATTTTTGTATGCTTACATCCATTATTTTGACGATGATACATACTTGATGTTGCTGACCACTCGTTCAGATGCTTTTTACCATCTCAAGGATTGCAGGATTCGTATCGAAACCGTCCTGTTGAAGTCCAATGTCCTTAGTGAAGTTCAGAGATCTTTGCTAGATGGTGGAATGCGTGTTGAAGATCTGCCACCCTTACCTCCTCATTCTGGATCATCATCTCATCTGGGCTATCCCGGGCTTCCAACAGATTCTCCTTATAGATCGAGGGAACCGGGTTCTGGCACTGGTGGTGCTGCTGGTTTGTGGCATTTCATATACCGAAGTATATTTCTGGATCAATACGTATCTTCAGATTTCTCATCACCAGTGAACAGTCCTCGGCAGAAGAAAAGGCTATATAGAGCTTACCAGAAGATTTTTTCTTCAATGCATGATAAAGGAATTGGACCTAACAAAACTCAGTTTAGAAGGGATGAAAACTATGTTCTGCTCTGTTGGGTAACACAGGATTTTGAGCTTTACGCTGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAATAGGATGTACGATTTGTCAAGTGTCACGCCCACTCCCAAAATGTTTCTTAAGTCGTCATCATCAGCTGTTAAGAGTATATGA	1548	0.4406	MSEITSPSPEIQSNSSSASSDNDPDPPIHLRLPPLSYSLFDAEPSEPNGVVHGSASSEPPKPSQSHEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGNHQVVFLVKGPIYLVCISCTEEPYESLRGQLELIYGQVIVILTKSINRCFERNPKFDMTPLLGGTDIVFSSLIHSFNWNPATFLHAYTCLPLTYATRQAAGAILQDVVDSGVLFAILMCRHKVISLVGAQKATLHPDDMLLLVNFIMSTESFRTSESFSPVCLPRYNPLAFLYAYIHYFDDDTYLMLLTTRSDAFYHLKDCRIRIETVLLKSNVLSEVQRSLLDGGMRVEDLPPLPPHSGSSSHLGYPGLPTDSPYRSREPGSGTGGAAGLWHFIYRSIFLDQYVSSDFSSPVNSPRQKKRLYRAYQKIFSSMHDKGIGPNKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRMYDLSSVTPTPKMFLKSSSSAVKSI	515

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g01345	515	PANTHER	SAND PROTEIN-RELATED	64	492	IPR004353	GO:0006623
	Adu08g01345	515	Pfam	Third Longin domain of FUZ, MON1 and HPS1	398	491	IPR043970	GO:0016192
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	477	490	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	97	117	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	131	145	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	235	248	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	461	475	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	79	96	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	259	275	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	182	194	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	284	307	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	211	232	IPR004353	GO:0006623
	Adu08g01345	515	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	312	338	IPR004353	GO:0006623
	Adu08g01345	515	PANTHER	BNAC04G15860D PROTEIN	64	492	-	-
	Adu08g01345	515	Pfam	Second Longin domain of FUZ, MON1 and HPS1	240	331	IPR043971	GO:0016192
	Adu08g01345	515	MobiDBLite	consensus disorder prediction	1	70	-	-
	Adu08g01345	515	Pfam	First Longin domain of FUZ, MON1 and HPS1	79	199	IPR043972	GO:0016192
	Adu08g01345	515	MobiDBLite	consensus disorder prediction	1	23	-	-
	Adu08g01345	515	MobiDBLite	consensus disorder prediction	361	390	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g01345	Adu-Chr8	22662218	22667012	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g01345	K20195		-	gmx:100814534	777.319

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu08g01345	08	22662218	22667012	Adu08g01345	08	22662218	22667012	ECH
	Adu08g01345	08	22662218	22667012	Adu03g00156	03	1475806	1476435	PCT