Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01339 ATGCGGATCTTCGTTCTCCTCTCCCTCACCACTCTCCTCCTCTTCTCCACCTTCTCAATTACTTATTGCAAGGACTCCGCCACCGCCACCACCGCCGCCGCTGATGACGATGAAGATCTCAGTTTCCTCGAAGAGGCCGATGACACCTCTTCGTCTCATCATCACCAGTACGAAGGTCACTACCCGGATCCCGACCAAATCGACGACGCTGATCTCGATGACTTCTCTGGCTTCGACGAGACAGAGTTCAATCCTGACGCCTACAAAGAAGCCGAAGTGGACGAAAAGGACGTCGTCATTTTGAAGGATAAGAACTTCACCGACGTTGTCAAGAACAACCGCTACGTTATGGTTGAGTTCTACGCGCCTTGGTGCGGTCACTGCCAAGCCTTGGCTCCCGAGTACGCTGCCGCCGCCACTGAGCTGAAGGGCGAGAACGTCATTTTGGCGAAGGTGGATGCAACGGAGGAGAACGAATTAGCGCAGGAGTACGATATACAGGGTTTTCCCACCGTGTACTTCTTCATTGATGGAGTTCACAAGACTTACAATGGCCTCAGGAACAAAGATGCTATAGTGAGCTGGATTAAGAAGAAGATAGGACCTGGTATCTACAACATTACCACAGTGGAGGATGCTGAACGCATTTTGACCTCCGAAAGCAAAGTTGTTTTGGGATTCCTCAACTCTTTAGTCGGTCCGGAGAGTGACGAGCTAGCTGCTGCATCAAGACTTGAGGATGAAGTCACCTTTTATCAAACTGTGAATCCTGATGTGGCAAAGCTTTTCCATATTGACCCGAGCATTAAGCGCCCAACTTTGATCCTGATCAAGAGAGAGGAGGAAAAACTGAACCATTTTGATGGTCAATTTGTGAAGTCTGAACTAGCAGACTTTGTGTTTGCCAATAAGCTTCCCTTGGTAACAACTTTTACAAGAGAAAGCGCACCATCAGTTTTTGAAAATCCAATCAAGAAACAGATATTGTTGTTTGCAACTTCAAACGATTCGGAGAAGTTCCTCCCGGTATTTCAAGATGCAGCAAAATTTTTCAAGGGGAAGCTAATCTTTGTGTATGTGCAAGTGGATAATGAAGATGTTGGAAAGCCGGTTTCAGATTACTTTGGTATATCTGGGGATGGTCCAAATGTACTTGCATACACTGGTAATGATGATGGAAGAAAATTTGTGCTTGATGGGGAGATGACTATTGACAAAATAAAGGCGTTTGGGGAAGATTTCCTTCAAGACAAGCTAAAACCTTTCTACAAGTCGGATCCAGTTCCAGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGGAATAACTTTGACGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTAGAGATTTATGCCCCCTGGTGTGGTCACTGCCAAGCACTGGAACCAATATACAACAAACTTGCAAAACATCTTCGCGGTATTGACTCACTTGTTATAGCCAAGATGGATGGAACAACAAATGAGCATCCTAGGGCAAAGTCTGATGGATTCCCCACACTACTCTTCTTCCCAGCAGGAAACAAGAGTTTTGACCCTATTACTGTTGATACAGATCGTACAGTGGTAGCTTTCTACAAGTTCCTCAAGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAGCCTCGGCCTCGACTTCTAAACCTGAGGGTACTGATGATACCAAGGAGAGTTCTGACGTCAAGGAAAGCAAGAGTAGCAGTAGCGACTTGAAGGATGAATTATAA 1758 0.4545 MRIFVLLSLTTLLLFSTFSITYCKDSATATTAAADDDEDLSFLEEADDTSSSHHHQYEGHYPDPDQIDDADLDDFSGFDETEFNPDAYKEAEVDEKDVVILKDKNFTDVVKNNRYVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEENELAQEYDIQGFPTVYFFIDGVHKTYNGLRNKDAIVSWIKKKIGPGIYNITTVEDAERILTSESKVVLGFLNSLVGPESDELAAASRLEDEVTFYQTVNPDVAKLFHIDPSIKRPTLILIKREEEKLNHFDGQFVKSELADFVFANKLPLVTTFTRESAPSVFENPIKKQILLFATSNDSEKFLPVFQDAAKFFKGKLIFVYVQVDNEDVGKPVSDYFGISGDGPNVLAYTGNDDGRKFVLDGEMTIDKIKAFGEDFLQDKLKPFYKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPIYNKLAKHLRGIDSLVIAKMDGTTNEHPRAKSDGFPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPASASTSKPEGTDDTKESSDVKESKSSSSDLKDEL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01339 585 ProSiteProfiles Thioredoxin domain profile. 413 543 IPR013766 -
Adu08g01339 585 SUPERFAMILY Thioredoxin-like 303 433 IPR036249 -
Adu08g01339 585 Gene3D Glutaredoxin 202 304 - -
Adu08g01339 585 Gene3D Glutaredoxin 430 544 - -
Adu08g01339 585 MobiDBLite consensus disorder prediction 549 585 - -
Adu08g01339 585 CDD PDI_a_family 99 196 - -
Adu08g01339 585 PANTHER PROTEIN DISULFIDE ISOMERASE 2 563 - -
Adu08g01339 585 Pfam Thioredoxin-like domain 240 410 - -
Adu08g01339 585 PANTHER PROTEIN DISULFIDE-ISOMERASE 2 563 - -
Adu08g01339 585 ProSiteProfiles Thioredoxin domain profile. 78 201 IPR013766 -
Adu08g01339 585 MobiDBLite consensus disorder prediction 560 585 - -
Adu08g01339 585 TIGRFAM pdi_dom: protein disulfide-isomerase domain 101 199 IPR005788 GO:0003756
Adu08g01339 585 CDD PDI_a_PDI_a'_C 436 538 - -
Adu08g01339 585 SUPERFAMILY Thioredoxin-like 93 201 IPR036249 -
Adu08g01339 585 ProSitePatterns Thioredoxin family active site. 117 135 IPR017937 -
Adu08g01339 585 SUPERFAMILY Thioredoxin-like 205 315 IPR036249 -
Adu08g01339 585 PRINTS Thioredoxin family signature 116 124 - -
Adu08g01339 585 PRINTS Thioredoxin family signature 165 176 - -
Adu08g01339 585 PRINTS Thioredoxin family signature 124 133 - -
Adu08g01339 585 TIGRFAM ER_PDI_fam: protein disulfide isomerase 96 585 IPR005792 GO:0003756
Adu08g01339 585 CDD PDI_b_family 204 303 - -
Adu08g01339 585 Gene3D Glutaredoxin 305 429 - -
Adu08g01339 585 MobiDBLite consensus disorder prediction 46 66 - -
Adu08g01339 585 Gene3D Glutaredoxin 90 201 - -
Adu08g01339 585 MobiDBLite consensus disorder prediction 45 66 - -
Adu08g01339 585 SUPERFAMILY Thioredoxin-like 431 543 IPR036249 -
Adu08g01339 585 CDD PDI_b'_family 325 415 - -
Adu08g01339 585 Pfam Thioredoxin 98 198 IPR013766 -
Adu08g01339 585 Pfam Thioredoxin 436 521 IPR013766 -
Adu08g01339 585 ProSitePatterns Thioredoxin family active site. 456 474 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01339 Adu-Chr8 22608052 22611967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01339 K09580 - gmx:100170706 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01339 08 22608052 22611967 Adu08g01339 08 22608052 22611967 ECH
Adu08g01339 08 22608052 22611967 Adu03g00162 03 1498978 1503035 PCT