Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01313 ATGAGAACCAGCAACCACTTGATTGGAGTACTGAACTTCTTGACATTCCTGGTCTCAGTTCCGATCCTAGGCGGCGGAATATGGCTGAGCAGCAGGGCCAACAACACCGACTGCATGAGGTTCCTGCAGTGGCCATTGATCATCATCGGGATCACCATCATGGTGGTGTCCTTGGCGGGTTTCGCCGGCGCGTGTTACCGCAACACCTTCCTAATGAGACTCTACCTGGTGGTCATGTTCATCGTCATAGCGGTCCTCATAGGCTTCATAGTGTTCGCCTACGTGGTCACCGAGAAAGGGTCGGGCCAGGTGGTGCCGAACCGGGCCTACTTGGATTACTACCTGCCGGACTACTCGGGCTGGTTGGAGGAGCGGGTCGCCAGTGACTCCTATTGGCCCAAGATAAGTTCTTGTATTAGGGATTCTAAGGTTTGTGCTAAGCTTTCTGCTGTTCCTGAAACTGCTGATATGTTCTACCAAAGAAAACTTTCTCCCATTCAGTCTGGTTGTTGCAAACCGCCAACAGAGTGTGGGTATGTGTACCAGAACGAGACAGTGTGGAACCAAGGCGGCGGCCTGGTTGGAACTGACCCTGATTGCAGCCGGTGGAGCAATGACCAGCAGATGCTCTGCTACTCGTGCGACTCTTGCAAGGCCGGCGTCCTCGCCAGCCTCAAGAAGAGCTGGAGGAAGGTCTCTGTCATCAACATTGTTGTCATGATCATCCTTGTCATCCTCTATGTCGTCGCTTACGCCGCCTACCGCAACAACCGCCGGATGGACAATGATGAGCCCTACGGTCAAGCAAGGATGACAAAGACACAACCTAGCGCCTTTCATCTCTAG 846 0.5343 MRTSNHLIGVLNFLTFLVSVPILGGGIWLSSRANNTDCMRFLQWPLIIIGITIMVVSLAGFAGACYRNTFLMRLYLVVMFIVIAVLIGFIVFAYVVTEKGSGQVVPNRAYLDYYLPDYSGWLEERVASDSYWPKISSCIRDSKVCAKLSAVPETADMFYQRKLSPIQSGCCKPPTECGYVYQNETVWNQGGGLVGTDPDCSRWSNDQQMLCYSCDSCKAGVLASLKKSWRKVSVINIVVMIILVILYVVAYAAYRNNRRMDNDEPYGQARMTKTQPSAFHL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01313 281 PANTHER TETRASPANIN-8-RELATED 1 275 IPR044991 GO:0009734|GO:0016021
Adu08g01313 281 Pfam Tetraspanin family 6 249 IPR018499 GO:0016021
Adu08g01313 281 PANTHER TETRASPANIN-3-LIKE 1 275 - -
Adu08g01313 281 PRINTS Transmembrane four family signature 6 29 - -
Adu08g01313 281 PRINTS Transmembrane four family signature 39 65 - -
Adu08g01313 281 PRINTS Transmembrane four family signature 66 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01313 Adu-Chr8 22307314 22309522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01313 1 273 Miscellaneous Gene Families AT5G60220 71.119 3.07e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01313 - - gmx:100788977 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01313 08 22307314 22309522 Adu08g01313 08 22307314 22309522 ECH
Adu08g01313 08 22307314 22309522 Adu03g00192 03 1802365 1807525 PCT