Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01253 ATGGCAAGCAATTCTTCTAATGGAGATCACCAAACATCAACAAAGCAGCCACCTCTGCCATCTCCCCTGCGTTTCTCCAAATTCTTTCAGTCCAACATGAGAATATTGGTCACTGGAGGAGCTGGATTCATCGGGTCTCACCTGGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTACTTCACTGGATCCAAGGACAATCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTTACGGAGCCATTGTTGATTGAGGTTGATCAGATCTATCATCTTGCATGCCCAGCATCTCCTATTTTCTACAAATACAATCCTGTGAAGACAATAAAGACAAATGTGATTGGAACACTGAACATGCTTGGGCTTGCGAAGCGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCTGAGGTTTATGGTGATCCTCTTGTGCACCCCCAACCTGAAAGCTACTGGGGAAATGTTAACCCTATTGGAGTTCGTAGCTGCTACGATGAGGGGAAGCGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGACTAGAAATACGCATTGCAAGAATCTTTAACACGTATGGACCGCGCATGAACATTGATGATGGACGTGTTGTTAGCAACTTCATTGCTCAGGCACTTCGTGGTGAACCCTTGACAGTCCAATCTCCAGGGACACAAACTCGCAGTTTCTGCTACGTCTCAGACATGGTTGATGGACTTATCCGTCTCATGGAAGGACCGAACACCGGACCAATCAACCTTGGAAACCCAGGCGAATTTACAATGGTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAAAGTGGAGATCAAGATGGTGGAGAACACCCCGGATGATCCACGACAGAGGAAACCGGACATATCACAGGCAAAGGAATTGTTGGGATGGGAACCGAAAATCAAGTTGCGCGATGGTCTTCCTCGCATGGAGGAGGATTTCCGTCTGAGGCTTGGAGTTGACAAGAGCAATTAA 1041 0.4524 MASNSSNGDHQTSTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDMVDGLIRLMEGPNTGPINLGNPGEFTMVELAETVKELINPKVEIKMVENTPDDPRQRKPDISQAKELLGWEPKIKLRDGLPRMEEDFRLRLGVDKSN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01253 346 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 346 - -
Adu08g01253 346 Gene3D - 32 340 - -
Adu08g01253 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
Adu08g01253 346 MobiDBLite consensus disorder prediction 1 21 - -
Adu08g01253 346 Pfam GDP-mannose 4,6 dehydratase 36 332 IPR016040 -
Adu08g01253 346 CDD UGD_SDR_e 33 337 - -
Adu08g01253 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 346 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01253 Adu-Chr8 21567575 21571300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01253 30 332 Miscellaneous Gene Families AT1G02000 24.478 6.00e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01253 K08678 - gmx:100790835 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01253 08 21567575 21571300 Adu08g01253 08 21567575 21571300 ECH
Adu08g01253 08 21567575 21571300 Adu03g00255 03 2396082 2399119 PCT
Adu03g00256 03 2399636 2403543 Adu08g01253 08 21567575 21571300 PCT