Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01232 ATGTGTGCTTTTGACTTATTGGCAACTGTAGCTGGCAAGTTGTTCTTGCAAGAGAAAGAGCATCCACTCACATCTGGGGATAAATCTTCGGAAAAGATTCAGCAAGGGTTTGTTAAAGAAGAGTGCCGGGATGCAAGTGAAGCATTCAAAACTGAGCTTTCCAACGAGGGTTGTCACAGAAGATGTGAGCATGGATTTGTTAAAGATGATTCCAAGAATGCAGATAAGCCATTCAAAGCCGAGCTTTATGTTGAAGGAAGTAGTGACATAAAATGCTTGTCAAATTCAGAAGTACAAAGTGAAAATTGCCATTTTAAGGAACACTCACATCCTAAAATTGATGGCAATTCACATGTTGCTTCAATGGTGGCCAATTCCAGTTGCTTGGAGAGGCTTGGTGCTGAGAGATTGGCGGATGGCAAAAACCATAATGAAGTGGGAAATCTTAGTAGCAAAGTTGAATTAGGTCTTAGTAGCAAAGTTGAATTAGGTTCTTCTGGAAGTCCATATACTATTGGATGCAACTTAGGTGGTGATGTAACTAAAGTAAAGGATGAGCTGCATAAGTTTGCTAAGGCACCAGTTGTTACTTCAACTGAGATGCGGTGCTTGGACGATCCCGTGGGTGAAAGGTCTCCTGTGCAGTTAAGTTCAGGTGGCAATGCCAAGTTGTCTGGGTGTGTTGACAACATGCCTTATAGCACATTGTCTGAAGGTTATGACAATGTGCCTGTAGTTAGTAGAGATGATGACGAAAACTTTTCAGGGTGTGATAACCCTTCTTTAGAAACAAAGTCCTTTAGGCCAATTAGTCATATAGGTGATCAGAGTATAAGGAAAACATTGGCAGCTAAATACTGTAAAGTTGCCCAACAGTCAAAACATGATACACTTTCTAATAGTGTTGAGGTTGTGAATGGAAATTTGAACGAAACTTACACCAGTAGGAAGAACTTTTATAAACGCCAAAGATCTGAAATGAATATTCCTTTCAAAAAGAGGAAAATTTTCAACTGTGGCTCTTTCTCAAATTCCAATGAACTTGTCAGAAGTGGTGGCACTTATGACAAGAAAAATGGTGCTTCTAGTACATCTCATGGGACGCACAAAGACACTGGAATGTCTTCCCTAGGAGCACATCAGTACTCTTCATTAGGATCTAAAGATTCTCATGTGAACCTTAGGATCAAATCGTTTAGAGTGCCTGAGCTTTTCATTGAGATACCGGAAACTGCAACCATTGAGTCCTTGAAGAGGTCAGTGATGGAGGCAGTGACTGCTGTACTTGGAGGTGGATTGCGTGTCGGTGTGATTCTCCATGGGAAAAAGGTTAGGGATGATAGTAAAACTCTACTTCAAGCAGGAATTTCTCATGATAAACAGCTGGATGCTTTGGGCTTTACCCTGGAGCCTATTTCTTCTCAAAGTCCAACACCTGTATGTGCTGCAGATTCTCGCCATGTTCCTACTGTAGACAAGCCTCAGCCGTTACCAAGGTACCCTTCTAGTGCAGCAATTCATCAAAGAAATCAGAGCTGTTCTGATGTGTTCCCCGAGCATCGGGTAACCAGTTTAGGTAACCTTGTTGAAAGTGATCAAGATTCAGCACTTTCTCCTGTCAACACAGCAGTTTATAAAAGACTAGCAGATTCAAGAGCTTTGGTTACTGTTCCAGAGATGGGCGTGCAAGCACTATCTCTGCTACCTGTGCCGCAGAAGTCAAAAAGACCCGAGACTGTGCAGCGCCGAATTCGTAGACCTTTTTCTGTTGCTGAGGTGGAAGCTCTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGTGATGTTAAACTTAGAGCTTTTGATAATGCAAAACACCGGACATATGTCGATTTGAAGGACAAATGGAAAACCCTGGTACACACGGCAAGAATATCCCCTCAGCAAAGAAGGGGAGAGCCTGTTCCACAAGAACTTTTGGATAGGGTCCTAACTGCTCATGCTTTTTGGTCCCAGCACCAAACTAAACAACAGCTCAACAAGCAGCACCAACAACAACAACATCAGCAGCAACCACAAACTTGCCTTCTCCTTCAATAA 2085 0.4259 MCAFDLLATVAGKLFLQEKEHPLTSGDKSSEKIQQGFVKEECRDASEAFKTELSNEGCHRRCEHGFVKDDSKNADKPFKAELYVEGSSDIKCLSNSEVQSENCHFKEHSHPKIDGNSHVASMVANSSCLERLGAERLADGKNHNEVGNLSSKVELGLSSKVELGSSGSPYTIGCNLGGDVTKVKDELHKFAKAPVVTSTEMRCLDDPVGERSPVQLSSGGNAKLSGCVDNMPYSTLSEGYDNVPVVSRDDDENFSGCDNPSLETKSFRPISHIGDQSIRKTLAAKYCKVAQQSKHDTLSNSVEVVNGNLNETYTSRKNFYKRQRSEMNIPFKKRKIFNCGSFSNSNELVRSGGTYDKKNGASSTSHGTHKDTGMSSLGAHQYSSLGSKDSHVNLRIKSFRVPELFIEIPETATIESLKRSVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQAGISHDKQLDALGFTLEPISSQSPTPVCAADSRHVPTVDKPQPLPRYPSSAAIHQRNQSCSDVFPEHRVTSLGNLVESDQDSALSPVNTAVYKRLADSRALVTVPEMGVQALSLLPVPQKSKRPETVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAFWSQHQTKQQLNKQHQQQQHQQQPQTCLLLQ 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01232 694 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 581 639 IPR017930 -
Adu08g01232 694 SMART sant 584 637 IPR001005 -
Adu08g01232 694 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 692 IPR031105 -
Adu08g01232 694 SUPERFAMILY Ubiquitin-like 386 477 IPR029071 -
Adu08g01232 694 CDD SANT_TRF 586 636 - -
Adu08g01232 694 MobiDBLite consensus disorder prediction 670 694 - -
Adu08g01232 694 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 692 - -
Adu08g01232 694 Gene3D - 573 680 - -
Adu08g01232 694 ProSiteProfiles Myb-like domain profile. 580 635 IPR001005 -
Adu08g01232 694 SUPERFAMILY Homeodomain-like 586 667 IPR009057 -
Adu08g01232 694 MobiDBLite consensus disorder prediction 353 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01232 Adu-Chr8 21405882 21411080 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01232 - - adu:107461637 1301.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01232 08 21405882 21411080 Adu08g01232 08 21405882 21411080 ECH
Adu08g01232 08 21405882 21411080 Adu03g00287 03 2634686 2639339 PCT