Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01169 ATGGGTTTTGAGTTAGTGTTAGTTAGCATGGTTTTGGTGTTGGGTTGTGGTGGTGGTGAGGGTAAAGAGTGCACAAACCAGCCTACACAAACACACACATTTCGTTACCATTTGTTAACATCTAAAAACCTAACATGGAAACAAGAGGTAATGTCACATTCACGCTATCATTTGACTCCAATAAGGAACATGTCCTTGAATGAGGAACAAGAAGATGATGATTGGACAATGCTGTTTGGGAGAATGAAGATGAAGAAGGAACCAGAGGGTTTACTGAAAGAAGTTTCGTTGCATGATGTGAGGTTGCATGGAGGTTCAATCCATGGTCAAGCACAGAACACAAACTTGAAGTATCTGTTAATGTTGGATGTTGACAGGTTGATTTGGAGCTTCAGGAAGACTTGTGGTCTCCCTACTCCTGGAACACCATATGGAGGCTGGGAAGATCCAACCATAGAAGTCCGGGGTCATTTTGTTGGGCATTATTTGAGTGCATCAGCTCTTATGTGGGCCAGCACACACAATGAAGCATTGAAGAAGAAAATGGCAGCACTTGTTGCAAATCTCTCTATCTGTCAGCAGAAGATTGGGACAGGATACCTTTCTGCATTTCCATCTGAGTTCTTTGATCGTTTTGAAGCAATTCAATATGTTTGGGCTCCCTATTATACCATTCACAAGATCATGGCTGGCCTTTTGGATCAACATTCTATTGCTGAGAACCCTCAAGCTCTGAAAATGGTGACATGGATGGTTGATTATTTTTACAAGAGAGTGAGGAATGTGATCAGAAAGTACAGCATAGATTGGCATTATCAAACCCTGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGACTATATTCCATTACAGGAGATCCAAAGCATCTAGTACTGGCTCATCTTTTTGACAAGCCATGCTTTTTGGGGTTGCTTGCTGTAAAGGCTAATGATATAGCTCAATTTCATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGATATGAAGTCACCGGTGATCCGCTTTATAAGGAAATTGGAACATTCTTTATGGATATTGTTAACTCTTCACACAGCTATGCAACTGGAGGAACATCAGTGAATGAGTTTTGGTCTGATCCAAATAGAATGACAGAGACCCTAAAAGAAGGAAACAATGAAGAATCATGCACAACTTATAACATGTTGAAGGTTTCGCGCAACCTGTTTAGATGGACTAAGGAGATATCATATGCTGATTATTATGAACGTGCATTGACAAATGGAGTATTAAGCATTCAAAGAGGAACAGAACCTGGAGTTATGTTATACTATCTTCCACAAGGTCCTGGGGCCTCCAAGGCTATATCAAAATTCGGTTGGGGAACTCAGTTTAACTCTTTCTGGTGCTGCTATGGAACTGGAATTGAATCATTCTCAAAGCTTGGAGATTCCATCTACTTTGAAGAGGAAGGGAAAAATCCTAGTCTTTACATCATTCAATACATATCAAGCTCATTAAACTGGAAATCTGCTCAAATCATGCTTAACCAGACAGTTGTTCCTCCATCTTCAATGGATTCCTTTCTCAGAATCTCACTCACTTTTTCTCCTACTAAGAAAACTAGTAGTACTTCATCTACTCTTAACCTTCGGTTACCAACTTGGACACATATCCATGGAAACTTTGTGTCAATAACCCGGAAATGGAGTGGTAGTGACAAGCTGACCCTTCAATTTCCCATTCCCCTAAGAACAGAGGCCATCAAAGATGACAGGCCTGAATATGCCTCCATTAGAGCAATTCTCTTTGGTCCCTACCTTCTTGCTGGACATAGCACTGCTGATTGGGACATTAAAACTGCTTCCAATGCTTCTATTACAGATTGGATTACCCCAATTCCAGCCATTTATAATACTCAGTTATTTTCATTCTACCAACACTTTTCAGGATCATCTTTTGTCTTAACAAGTTTAAACAATTCACTGACAATGGAAAAATCACCAAAGCCTGGGACTAGTTTGGCTCTTCATGCAACCTTTAGAATCATTAATATCCAAGCAAAACATTCCTCAAGGCTTTCAACTACACTGAGAGATTTTATTGGCAAATCAGTGATGTTAGAACCGTTTGATCATCCTGGAACACAAGTAGGTTCTGTTTTTGTTCTGGTAGCAGGATTGGATGGAAGAAATGAAAGCATATCCTTAGAATCCAAAAGCCATAAAGGGTGCTTTGTGCATAGTGGCATGAGTTCTGGTAAAGAAGTAAAAATAAGATGCAAGTCTAATTCTGATGCTGATGCTTCTAGTTTCAACAAAGATGCAAGCTTTATTGCTAGAAGAGGACTCAGAAAATATGATCCTATAAGCTTTGTGGCTAAGGGAGCAAATAGAAATTTTCTACTGGAGCCATTATTGGCCTTCAGAGATGAGCATTATACTGTTTATTTCAACATTCAAGAGTGA 2463 0.3967 MGFELVLVSMVLVLGCGGGEGKECTNQPTQTHTFRYHLLTSKNLTWKQEVMSHSRYHLTPIRNMSLNEEQEDDDWTMLFGRMKMKKEPEGLLKEVSLHDVRLHGGSIHGQAQNTNLKYLLMLDVDRLIWSFRKTCGLPTPGTPYGGWEDPTIEVRGHFVGHYLSASALMWASTHNEALKKKMAALVANLSICQQKIGTGYLSAFPSEFFDRFEAIQYVWAPYYTIHKIMAGLLDQHSIAENPQALKMVTWMVDYFYKRVRNVIRKYSIDWHYQTLNEETGGMNDVLYRLYSITGDPKHLVLAHLFDKPCFLGLLAVKANDIAQFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDIVNSSHSYATGGTSVNEFWSDPNRMTETLKEGNNEESCTTYNMLKVSRNLFRWTKEISYADYYERALTNGVLSIQRGTEPGVMLYYLPQGPGASKAISKFGWGTQFNSFWCCYGTGIESFSKLGDSIYFEEEGKNPSLYIIQYISSSLNWKSAQIMLNQTVVPPSSMDSFLRISLTFSPTKKTSSTSSTLNLRLPTWTHIHGNFVSITRKWSGSDKLTLQFPIPLRTEAIKDDRPEYASIRAILFGPYLLAGHSTADWDIKTASNASITDWITPIPAIYNTQLFSFYQHFSGSSFVLTSLNNSLTMEKSPKPGTSLALHATFRIINIQAKHSSRLSTTLRDFIGKSVMLEPFDHPGTQVGSVFVLVAGLDGRNESISLESKSHKGCFVHSGMSSGKEVKIRCKSNSDADASSFNKDASFIARRGLRKYDPISFVAKGANRNFLLEPLLAFRDEHYTVYFNIQE 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01169 820 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 819 - -
Adu08g01169 820 SUPERFAMILY AbfB domain 717 800 IPR036195 GO:0046373|GO:0046556
Adu08g01169 820 Gene3D - 699 803 - -
Adu08g01169 820 SUPERFAMILY Six-hairpin glycosidases 155 431 IPR008928 GO:0005975
Adu08g01169 820 Pfam Beta-L-arabinofuranosidase, GH127 100 608 IPR012878 -
Adu08g01169 820 Coils Coil 175 195 - -
Adu08g01169 820 PANTHER - 7 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01169 Adu-Chr8 20653793 20657942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01169 K09955 - gmx:100791803 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01169 08 20653793 20657942 Adu08g01169 08 20653793 20657942 ECH
Adu08g01169 08 20653793 20657942 Adu03g00347 03 3116425 3122127 PCT