Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01083 ATGTTTTCGGGGGTGACAAGTCTGGTGAACAGGGGACACAAGATTAAGGGCACGGTGGTGCTGATGCGCAAGAACGTCCTTGACGTCAACTCCCTTACCAGCGCTCAGGGACTCATCGGTCAAGGCGTCGGCCTCGTCGGCTCAACCATCGATAATCTCACTGCCTTCTTGGGCCGCTCTGTCTCCCTCCACCTCATTAGTGCCACCAAACCAGATGAGAATTGGAAGGGCAAAGTTGGAAAGAGTACGTTTTTGGAAGGTATAATATCTTCGTTGCCAACATTGGGAGCAGGGCAATCTGCCTTCACCATTCATTTCGAATGGGATGATGGTGAGATGGGAATTCCAGGAGCATTTTACATCAAGAATTTCATGCAAACCGAGTTCTTCCTCCTCACTTTGACTCTTGAAGACATTCCAAACCATCCAAATCTCAAAATCTACTTTGTTTGCAACTCCTGGATTTATAATGCTAAAAACTACAAAACCGATCGTATTTTCTTTTCCAACAAGACATATCTTCCAGGTGACACGCCAGCACCACTTGTAAAGTACAGGGAAGATGAATTGGAGAATTTAAGAGGAGATGGAAAAGGAGAGCGCAAAGAATATGATAGGATCTATGATTATGATGTTTACAATGATTTGGGGAATCCAGATAGCAATGAAAAATATGCTCGCCCTGTTCTTGGAGGATCTACTTTACCTTACCCTCGTAGAGGAAGAACAGGAAGGCCACCTACTAACAAAGATCCTAAGAGTGAGAAACGGAGCGATTTTGTTTACCTACCAAGGGACGAAGCATTTGGTCACTTGAAGTCATCAGATTTTCTAACTTATGGACTAAAATCTTTTGATAATTTTGCTGAAGTGGATAAACTCTATACGGGTGGAATTACACTACCTACAAACTTTCTCAGCAAATTTTCCCCTTTGCCAGTACTCAAGGAAATTCTACGAACAGATGGTGAACAATTCCTTAAATATCCACCACCCAAAGTCATGCAAGTGAATAAATCTGCATGGATGACTGATGAAGAATTTTCTAGAGAAACACTTGCTGGTGTAAATCCTAATGTCATTAAGAGTCTTGAGGAGTTTCCACCAGGTAGCAAGCTAGATAGTAAAGTCTATGGTGATCATACTAGTACAATGAAAAAAGAACATTTAGAGCCTAACTTAGGAGGGCTTACTGTAAAACAGGCTATTGAGAAGAAGAAATTGTTCATTCTCGATCACCATGACTATCTGATTCCATATTTGAGAAGAATAAATTCAAGCAAGACAAAGGCCTATGCTACAAGGACTATTTTCTTCTTGAAAGATGATGGAACTTTAAAGCCACTGGCCATTGAGTTAAGCAAGCCACATCCTCAAGGAGAAGAGCATGGTCCTGTGAGTGATGTCTATCTACCAGCACATGAAGGAGTTGAAGGTTATATTTGGGTACTGGCCAAGGCATATGTTGTTGTAAATGACTCATGCTATCACCAACTTGTTAGTCATTGGTTAAACACTCATGCAGTTGTTGAACCATTTGTGATAGCAACAAATAGGCATCTGAGTGTGGTTCACCCAATTAATAAACTACTTTCCCCACACTACCGTGACACCATGAATATAAATTCACTTGCTCGGAAAGCCTTGATTAATGCAGATGGTATTATAGAACAAACATTCTTGTGGGGTAGATATGCTTTGGAAATGTCTGCTGTACTCTATAAGGATTGGGTTTTTCTAGATCAAGCATTACCTAATGATCTCATCAAGAGAGGAGTGGCAGTTAAGGATTCATCTTCTCCCCATGGTGTCCACCTTGTGATTGAGGATTACCCTTATGCTTCTGATGGATTAGAAATATGGGATGCTATTAAATCATGGGTTAAAGAGTATGTGTTCTTTTACTACAACTCAGATGATGCACTAAAACAAGACAATGAACTCCAAGAATGGTGGAAAGAGCTTGTAGAAGTAGGTCATGGTGACAAGAAGAATGAGACATGGTGGCCAAAGATGGAAACTCGAAACGAGTTGATTGAAGCTTCAACCACTCTCATATGGATTGCTTCAGCACTTCATGCAGCTATTAATTTTGGCCAATACCCTTATGGAGGTTACATTCTTAACCGTCCAACACTTAGCAGAAGATTCATGCCTGAGAAAGGGTCTCCTGAGTATGATGAATTGGCTAAGAATCATGAGAAGGAGTTCTTGAAAACAATCACAGGGAAGAAAGAGACACTAATTGATCTTACCGTTATTGAAATTTTGTCAAGGCATGCTTCTGATGAGTCCTACCTTGGACAAAGGGATGATGGTGACTTTTGGACTTGTGATACTGAGGCATTAGATGCCTTTAAGAGATTTGGAAAGAAACTTGCAGAGACTGAACAAAGATTGATGCAGAAGAACAATGATGGATCATTGAAAAATCGTTCTGGACCAGCTAAGATGCCTTACACTTTGCTTTATCCTTCTAGTGAGGAAGGGTTGACTTTCAGAGGAATTCCAAATAGTATCTCTATCTAA 2529 0.4073 MFSGVTSLVNRGHKIKGTVVLMRKNVLDVNSLTSAQGLIGQGVGLVGSTIDNLTAFLGRSVSLHLISATKPDENWKGKVGKSTFLEGIISSLPTLGAGQSAFTIHFEWDDGEMGIPGAFYIKNFMQTEFFLLTLTLEDIPNHPNLKIYFVCNSWIYNAKNYKTDRIFFSNKTYLPGDTPAPLVKYREDELENLRGDGKGERKEYDRIYDYDVYNDLGNPDSNEKYARPVLGGSTLPYPRRGRTGRPPTNKDPKSEKRSDFVYLPRDEAFGHLKSSDFLTYGLKSFDNFAEVDKLYTGGITLPTNFLSKFSPLPVLKEILRTDGEQFLKYPPPKVMQVNKSAWMTDEEFSRETLAGVNPNVIKSLEEFPPGSKLDSKVYGDHTSTMKKEHLEPNLGGLTVKQAIEKKKLFILDHHDYLIPYLRRINSSKTKAYATRTIFFLKDDGTLKPLAIELSKPHPQGEEHGPVSDVYLPAHEGVEGYIWVLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFVIATNRHLSVVHPINKLLSPHYRDTMNINSLARKALINADGIIEQTFLWGRYALEMSAVLYKDWVFLDQALPNDLIKRGVAVKDSSSPHGVHLVIEDYPYASDGLEIWDAIKSWVKEYVFFYYNSDDALKQDNELQEWWKELVEVGHGDKKNETWWPKMETRNELIEASTTLIWIASALHAAINFGQYPYGGYILNRPTLSRRFMPEKGSPEYDELAKNHEKEFLKTITGKKETLIDLTVIEILSRHASDESYLGQRDDGDFWTCDTEALDAFKRFGKKLAETEQRLMQKNNDGSLKNRSGPAKMPYTLLYPSSEEGLTFRGIPNSISI 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01083 842 SMART LH2_4 13 170 IPR001024 GO:0005515
Adu08g01083 842 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 6 842 - -
Adu08g01083 842 Pfam Lipoxygenase 182 825 IPR013819 GO:0016702|GO:0046872
Adu08g01083 842 PANTHER LIPOXYGENASE 6 842 IPR000907 GO:0016702|GO:0046872
Adu08g01083 842 PRINTS Plant lipoxygenase signature 139 157 IPR001246 GO:0016491
Adu08g01083 842 PRINTS Plant lipoxygenase signature 327 343 IPR001246 GO:0016491
Adu08g01083 842 PRINTS Plant lipoxygenase signature 204 220 IPR001246 GO:0016491
Adu08g01083 842 PRINTS Plant lipoxygenase signature 754 768 IPR001246 GO:0016491
Adu08g01083 842 PRINTS Plant lipoxygenase signature 165 186 IPR001246 GO:0016491
Adu08g01083 842 PRINTS Plant lipoxygenase signature 432 456 IPR001246 GO:0016491
Adu08g01083 842 PRINTS Plant lipoxygenase signature 366 385 IPR001246 GO:0016491
Adu08g01083 842 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 12 173 IPR036392 GO:0005515
Adu08g01083 842 Gene3D - 279 340 IPR027433 -
Adu08g01083 842 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 172 842 IPR013819 GO:0016702|GO:0046872
Adu08g01083 842 CDD PLAT_LH2 13 170 IPR042057 -
Adu08g01083 842 ProSitePatterns Lipoxygenases iron-binding region signature 1. 497 511 IPR020833 GO:0016702|GO:0046872
Adu08g01083 842 SUPERFAMILY Lipoxigenase 175 842 IPR036226 -
Adu08g01083 842 Gene3D - 341 474 - -
Adu08g01083 842 ProSiteProfiles PLAT domain profile. 39 169 IPR001024 GO:0005515
Adu08g01083 842 MobiDBLite consensus disorder prediction 219 257 - -
Adu08g01083 842 ProSitePatterns Lipoxygenases iron-binding region signature 2. 524 534 IPR020834 GO:0016702|GO:0046872
Adu08g01083 842 Pfam PLAT/LH2 domain 75 168 IPR001024 GO:0005515
Adu08g01083 842 PRINTS Lipoxygenase signature 497 514 IPR013819 GO:0016702|GO:0046872
Adu08g01083 842 PRINTS Lipoxygenase signature 517 537 IPR013819 GO:0016702|GO:0046872
Adu08g01083 842 PRINTS Lipoxygenase signature 479 496 IPR013819 GO:0016702|GO:0046872
Adu08g01083 842 Gene3D - 174 272 - -
Adu08g01083 842 Gene3D PLAT/LH2 domain 4 173 - -
Adu08g01083 842 Gene3D - 475 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01083 Adu-Chr8 19616052 19620110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01083 1 842 Acyl Lipid Metabolism Gene Families AT1G55020 55.682 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01083 K15718 - gmx:547860 1343.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01083 08 19616052 19620110 Adu09g00563 09 7100192 7106333 PCT