Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00896 ATGGATTCTTCACAATCACAACAAGGGTCTAAGCTGGCTGGTTTGGTGGAGAATGCATCGATTCAGAGGGATGGATCTCGATTGGGTCATGGCGTCCCTATCTATGCTAAGGAGCTCATCGCCGGTGGCTTCGCCGGTGCGATTTCTAAGACCACCGTTGCACCCCTCGAACGGGTCAAGATTCTCTGGCAGACAAGGACAGCAGGATTTCATACTCTGGGTGTGTATCAATCATTGAAAAGGTTATCAAAGCATGAAGGATTTCTAGGACTATATAAAGGAAATGGAGCTAGCGTTATTCGGATTGTTCCATATGCAGCCTTGCATTTTATGACATATGAGCGATATAAAAGCTGGATCTTGAGCAATTATCCAATGTTAGGATCAGGTCCTATTGTTGATCTCTTAGCTGGTTCCGCAGCAGGAGGAACTTCAGTAATATGTACATATCCCTTAGATCTTGCCCGCACCAAACTCGCTTATCGGGTAGTAGAGAAAAAAGGCAGTTTCAAAGATGGTGTGAAAGGAGGTCATTCTCAAACTGGTCACAACAGCATTAAAAGTGTTCTTACAAGTGTCTACAGAGAAGGGGGAGTTCGTGGACTTTATAGAGGTGCAGGACCAACTATTACTGGAATACTTCCATATGCTGGTTTAAAGTTCTACACGTATGAGACATTGAAATTGCATGTTCCTGAAGAACATCAAAAGTCCATTTTGATGCGCCTCTCTTGTGGAGCCTTAGCTGGGTTATTTGGCCAGACCTTAACATACCCTTTAGATGTTGTTAAGAGACAAATGCAGGTTGGTAACTTGGAAAATGCAGCTCATGAAAATGCCAGATACCGAAATACATTCCATGGACTAAGAACAATTGTTCAAAACCAAGGGTGGAGACAGTTGTTTGCAGGTGTAAGCATCAACTATATAAGGGTATGCTAG 942 0.4321 MDSSQSQQGSKLAGLVENASIQRDGSRLGHGVPIYAKELIAGGFAGAISKTTVAPLERVKILWQTRTAGFHTLGVYQSLKRLSKHEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILSNYPMLGSGPIVDLLAGSAAGGTSVICTYPLDLARTKLAYRVVEKKGSFKDGVKGGHSQTGHNSIKSVLTSVYREGGVRGLYRGAGPTITGILPYAGLKFYTYETLKLHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGNLENAAHENARYRNTFHGLRTIVQNQGWRQLFAGVSINYIRVC 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00896 313 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 23 312 - -
Adu08g00896 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 119 IPR018108 -
Adu08g00896 313 PANTHER SOLUTE CARRIER FAMILY 25 23 312 - -
Adu08g00896 313 Pfam Mitochondrial carrier protein 237 312 IPR018108 -
Adu08g00896 313 Pfam Mitochondrial carrier protein 35 122 IPR018108 -
Adu08g00896 313 Pfam Mitochondrial carrier protein 131 231 IPR018108 -
Adu08g00896 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 230 IPR018108 -
Adu08g00896 313 SUPERFAMILY Mitochondrial carrier 36 312 IPR023395 -
Adu08g00896 313 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Adu08g00896 313 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Adu08g00896 313 PRINTS Mitochondrial carrier protein signature 246 268 IPR002067 GO:0055085
Adu08g00896 313 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Adu08g00896 313 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Adu08g00896 313 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Adu08g00896 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 313 IPR018108 -
Adu08g00896 313 Gene3D Mitochondrial carrier domain 34 313 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00896 Adu-Chr8 16456807 16459865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00896 32 312 Organic Solute Cotransporters AT4G26180 56.383 2.93e-111 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00896 - - lang:109343818 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00896 08 16456807 16459865 Adu08g00896 08 16456807 16459865 ECH