Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00876 ATGGGTCGTGTTCCGACGAAGCAGCAGAAGAATAACAGATCGAAGGATGGCGGCGATGGAACTCAAGAAAAGCAGAAACCGAGTCTGAAGGGTGCAGAGAGGTCGGCGTACTTCGCTCGGAGAGAGGCGGCGAAGGTTCTCAGAGTGGTTCTGCAGGGCGACGCCAACCGCCGTGCACTGGCCTCCATCAAATCCCTCATCTACAAACCCTCTGTCAGGAACAAGAAGGCCACTTTCGCCCTCATTTGCCAGACTCTCAAACATCTTCCCATTATTAAAGATGTATTGGAAGCTTCTTCTATACTCAACACCAAGTGGAAGAGACAACAAGAATTGGTTTACATCATTGTGTATGATATTCTTTTCGGCCAGGCAGTTGCAGTGGCTGGTGATGCAGAGAAGTATCTCATGCGACATAAGAACGCACTACAATCCACTTTGAAACAGCTTTTGTTACGGAGAAATGTGAAGAACGTTAAACAGTTGATTGCTCTGAATCAGCTTCCTGATGTTTCCCTGCCTCGTTATGTTCGTGTCAATACGCTCAAGCTGGATGTCGATTCTGCCTTACTTGAGCTTCAGCAAAAGTACTCGGTTGAAAAAGATGATTTACTGCCTGACTTGCTGATACTCCCACCGGGCACTGATTTGCATGATCATCCCCTTGTCAACAATGGAAGTATCTTTATGCAAGTTATTGATGCATGTGCTGCTCCAGGAAACAAAACTGTCCACCTAGCTGCCCTTATGAAGAGGAAGGGTAGGATTATAGCATGTGAACTGAATAAACAAAGGATTAAGCGTTTGAAAGAGACTATCAAACTATCCGGGGCTTCTAACATACATGTTCTCAATGAGGATTTCTTGAACATAGATCCCAAGGCACCTTCATATTCTAAGGTGAAGGCTATTCTTTTGGATCCTTCCTGTTCTGGTTCTGGTACTGCTGCTTCAAGATTAGACCATCTGCTCCCGTCTAAAGCAGCAGGTCAGGACACCGATATGGAAAGATTGAACAAGCTTGCAGCTTTCCAGAGAAAGGCTCTGCAGCATGCTTTAAGCTTTCCAGCAGTTGAAAAAATTGTGTATAGCACATGTTCAATCAACCAAATTGAGAATGAAGATGTCATCAAATCTGTTCTTCCCATTGCCGAATCACATGGATTTGAACTTGTGAAACCCTTCCCTGAATGGCACTGTCGTGGCCTACCTGTGTTTAAAGGCTCTGAAAACTTGGTTCGGACAGATCCTGCCACAGATGGCGAGGGCTTCTTCATTGCTCTGTTTGCCAAGAAGAAAAATGTGCAAAAGAAGAAGCAACACTTCTTTCCCCGCATTCATACTGATCCTTTCAGAACCTGGTTGTATTACCGGCTCAACGGCCCTTGA 1389 0.4528 MGRVPTKQQKNNRSKDGGDGTQEKQKPSLKGAERSAYFARREAAKVLRVVLQGDANRRALASIKSLIYKPSVRNKKATFALICQTLKHLPIIKDVLEASSILNTKWKRQQELVYIIVYDILFGQAVAVAGDAEKYLMRHKNALQSTLKQLLLRRNVKNVKQLIALNQLPDVSLPRYVRVNTLKLDVDSALLELQQKYSVEKDDLLPDLLILPPGTDLHDHPLVNNGSIFMQVIDACAAPGNKTVHLAALMKRKGRIIACELNKQRIKRLKETIKLSGASNIHVLNEDFLNIDPKAPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQDTDMERLNKLAAFQRKALQHALSFPAVEKIVYSTCSINQIENEDVIKSVLPIAESHGFELVKPFPEWHCRGLPVFKGSENLVRTDPATDGEGFFIALFAKKKNVQKKKQHFFPRIHTDPFRTWLYYRLNGP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00876 462 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 25 436 IPR023267 GO:0001510
Adu08g00876 462 Pfam 16S rRNA methyltransferase RsmB/F 232 429 IPR001678 GO:0008168
Adu08g00876 462 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 135 432 IPR001678 GO:0008168
Adu08g00876 462 MobiDBLite consensus disorder prediction 9 34 - -
Adu08g00876 462 Gene3D Vaccinia Virus protein VP39 226 439 IPR029063 -
Adu08g00876 462 PANTHER BNAA09G04380D PROTEIN 25 436 - -
Adu08g00876 462 PRINTS RNA (C5-cytosine) methyltransferase signature 414 431 IPR023267 GO:0001510
Adu08g00876 462 PRINTS RNA (C5-cytosine) methyltransferase signature 233 243 IPR023267 GO:0001510
Adu08g00876 462 PRINTS RNA (C5-cytosine) methyltransferase signature 358 374 IPR023267 GO:0001510
Adu08g00876 462 PRINTS RNA (C5-cytosine) methyltransferase signature 302 314 IPR023267 GO:0001510
Adu08g00876 462 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 173 432 IPR029063 -
Adu08g00876 462 MobiDBLite consensus disorder prediction 1 34 - -
Adu08g00876 462 CDD AdoMet_MTases 232 320 - -
Adu08g00876 462 Gene3D Sun protein; domain 3 166 225 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00876 K15264 - gmx:100775620 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00876 08 16294101 16297809 Adu08g00876 08 16294101 16297809 ECH