Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00875 ATGGATTTCAGGTTGATGGGACTCGATTCTCCATTGCTGAGCACCATTCACCACATGATGGATATGAGCGACGACAATGCCGACGCCAAGAACATCAACGCTCCCACAAGGACCTACGTGCGTGACGCGAAGGCGATGGCGGCTACTCCGGCCGACGTGAAGGAGTATCCTCAGTCGTACGTGTTCGTGATCGACATGCCGGGACTGAAGTCCGGTGACATCAAGGTTCAGGTGGAGGACGACAACGTTCTGATCATCAGCGGCGAGAGGAAGAGGGATGAAGAGAAAGAAGGTGCTAAGTATTTGAGGATGGAGAGGAGGGTTGGAAAATTCATGCGCAAGTTTGTGTTACCGGAGAATGCAAACACTGATGCTATCTCTGCTGTGTGTCAAGACGGAGTTCTCACCGTCACCGTTCAGAAGCTTCCTCCTCCTGAGCCTAAGAAGCCTAAGACTATTGAGGTTAAGATTGCTTGA 477 0.5136 MDFRLMGLDSPLLSTIHHMMDMSDDNADAKNINAPTRTYVRDAKAMAATPADVKEYPQSYVFVIDMPGLKSGDIKVQVEDDNVLIISGERKRDEEKEGAKYLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKIA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00875 158 SUPERFAMILY HSP20-like chaperones 28 150 IPR008978 -
Adu08g00875 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Adu08g00875 158 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 157 - -
Adu08g00875 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 158 IPR002068 -
Adu08g00875 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 157 - -
Adu08g00875 158 Gene3D - 9 157 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00875 Adu-Chr8 16292551 16293520 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00875 K13993 - pop:7462237 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00875 08 16292551 16293520 Adu08g00875 08 16292551 16293520 ECH