Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00861 ATGGTGGTTTCCGATGCTCCCAACGGCGGTGGCTCTTCGTCTCCGCCACTGGTGGTGGAGCAAACCAACACGCTTGGGATCACGAAGCCTATCTCTCTCGCCGGTCCCACCGACGCCGATTTACATCGGAACGCCGAATTGGAGAAGTTTCTGCTTGATTCGGGACTCTACGAGAGCAATGAAGAAGCTGCTACCAGGAGAGAGGTTCTTCAGCGCCTTGATCAGACTGTTAAAAGTTGGGTGAAGCAGTTAACGCGTCAACGAGGCTATACGGATCAGATGGTTGAGGATGCCAATGCCGTTATTTTCACTTTCGGTTCTTATCGACTAGGGGTACATGGACCAGGAGCTGACATAGACACTTTGTGTGTTGGCCCTTCTTATGTGAATCGGGAGGAAGACTTCTTTATCATTCTGCATAACATCTTGGCTGAAATGGAAGAAGTTACTGAACTTCAACCAGTTCCAGATGCTCATGTCCCCGTAATGAAATTCAAGTTCCAGGGAATATCTATAGATTTGCTTTATGCAAGTATATCTCTTTTGGTTGTGCCTGAAGACCTGGACATCTCACATGGCTCAGTGCTGTATGATGTTGATGAACCTACTGTTCGAAGTCTTAATGGCTGCCGGGTGGCAGATCAAATTCTTAAACTTGTTCCAAATGTTGAGCACTTCCGAACCACACTGAGATGTTTAAAGTTTTGGGCTAAAAGGCGTGGTGTTTATTCAAATGTTACGGGATTCCTTGGAGGCGTGAATTGGGCTCTATTAGTTGCTCGAATTTGCCAGCTTTACCCTAATGCAATCCCTAGTATGCTGGTTTCTCGATTCTTTAGGGTATATACACAGTGGAGGTGGCCAAATCCTGTCATGCTGTGCACAATAGAGGAAAATGAACTGGGTTTCCCAGTTTGGGATCCTCGTAGAAACCCGCGGGACAGATATCACATTATGCCAATTATTACTCCTGCATACCCTTGCATGAATTCCAGCTACAATGTCTCTGCAAGCACTCTTCGTGTTATGAAGGAACAGTTTCGCTATGGCAACAAGATTTGTGATGAAATTGAGCTCAGTAAAGCCCAATGGAGTGCACTTTTTCAGCCATATTTCTTTTTCGAAGCCTACAAAAACTATTTACAAGTGGACATCCTTGCAGCAGACACTGATGACTTGTTAGCATGGAAAGGTTGGGTAGAATCTCGATTGAGGCAGCTCACCCTGAAGATAGAGCGGGATACAAATGGGATGTTGCAGTGTCATCCTTACCCACATGAGTATGCAGACACATCCAGACATTGTGCTCATTCTGCATTTTTCATGGGCTTGCAAAGAAAAGAGGGAGAAAAAGGTCAAGAGGGACAACAATTTGATATACGTGGAACGGTTGATGAATTCAGGCAAGAAATAAATATGTATATGTACTGGAAGCCAGGGATGGAAATTTTTGTTTCCCATGTACGTCGAAAGCAGCTCCCTTTATTTGTATTTCCAGATGGTTACAAACGCAATCGGATGTCAAGGCACATAAGCCATTCAGCTGAAAAAATGGGTGAGGATGCCGCAAAGTCCAACCTAGGGTCTTCTGAAAGAAGTGTCAAGAGGAAAAATGACCATGAAATGTTGGATGAGAAGCTAGGCAAACCAGAGAAGAGGGCCTCTATCAGCCCACAGAGGCTAGTGTGCGTCTCTCCAGAAAGTTGTTCATCTCAAATGAGTATTGATGGTACCAAAGGGGTTAGGTTAGCCAAGAATGCTGGCACCAAATGCGAAATTAAGTCATCTAATGGACTCCTAGAAAATGGAATAAGTACCGAAGGAGCTTACGTGCATCTTAGTGAAACAGGTGGTGTTCATCCCAAAAATGATAGTCAGAACTCAAGGTGTTCAGAAGTTCAGAATGAGAATGGAGTCGATAGGAACAAAGCTGGGGAAATGGATCTGGATTGCTTGGAAAGTGCAGAAACTGCATCTTCCAAAAGCTTGTCAAACTGTAAAGAGAGTGCTGTTGATATGGATCAACGACTAGACAATACTCATAATTTCCAAAGAACTGAATATTCAGATTATGTACCAACTGCGAGCTCCCAGGCCCTCAATTGCGAGGTGAGTTTCTTCACTTGA 2127 0.4438 MVVSDAPNGGGSSSPPLVVEQTNTLGITKPISLAGPTDADLHRNAELEKFLLDSGLYESNEEAATRREVLQRLDQTVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHNILAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCTIEENELGFPVWDPRRNPRDRYHIMPIITPAYPCMNSSYNVSASTLRVMKEQFRYGNKICDEIELSKAQWSALFQPYFFFEAYKNYLQVDILAADTDDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSRHCAHSAFFMGLQRKEGEKGQEGQQFDIRGTVDEFRQEINMYMYWKPGMEIFVSHVRRKQLPLFVFPDGYKRNRMSRHISHSAEKMGEDAAKSNLGSSERSVKRKNDHEMLDEKLGKPEKRASISPQRLVCVSPESCSSQMSIDGTKGVRLAKNAGTKCEIKSSNGLLENGISTEGAYVHLSETGGVHPKNDSQNSRCSEVQNENGVDRNKAGEMDLDCLESAETASSKSLSNCKESAVDMDQRLDNTHNFQRTEYSDYVPTASSQALNCEVSFFT 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00861 708 Pfam Nucleotidyltransferase domain 99 175 IPR002934 GO:0016779
Adu08g00861 708 Gene3D Beta Polymerase, domain 2 58 214 IPR043519 -
Adu08g00861 708 MobiDBLite consensus disorder prediction 619 637 - -
Adu08g00861 708 Gene3D - 26 368 - -
Adu08g00861 708 MobiDBLite consensus disorder prediction 615 637 - -
Adu08g00861 708 CDD NT_PAP_TUTase 66 220 - -
Adu08g00861 708 PANTHER NUCLEAR POLY(A) POLYMERASE 4 17 654 - -
Adu08g00861 708 Pfam Poly(A) polymerase central domain 26 369 IPR007012 GO:0004652|GO:0043631
Adu08g00861 708 SUPERFAMILY PAP/OAS1 substrate-binding domain 221 370 - -
Adu08g00861 708 Gene3D Poly(A) polymerase predicted RNA binding domain 373 488 - -
Adu08g00861 708 Pfam Poly(A) polymerase predicted RNA binding domain 433 505 IPR007010 GO:0003723|GO:0043631
Adu08g00861 708 Pfam Poly(A) polymerase predicted RNA binding domain 373 433 IPR007010 GO:0003723|GO:0043631
Adu08g00861 708 PANTHER POLY A POLYMERASE 17 654 - -
Adu08g00861 708 SUPERFAMILY Nucleotidyltransferase 22 219 IPR043519 -
Adu08g00861 708 MobiDBLite consensus disorder prediction 514 554 - -
Adu08g00861 708 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 373 498 IPR011068 GO:0003723|GO:0016779|GO:0031123
Adu08g00861 708 MobiDBLite consensus disorder prediction 530 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00861 Adu-Chr8 16068884 16075085 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00861 K14376 - gmx:100802620 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00861 08 16068884 16075085 Adu08g00861 08 16068884 16075085 ECH