Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00860 ATGGCTTCTAGTGATGCCAATATGAAGATCGTTCATGGCGAAGCTGGTTATATACTCGAAGACGTTCCTCACTTATCCGACTACATTCCCAATCTTCCTGTACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTTACAGTTGATGATTATGATTTTTTATTTTTTCTATTTTTTTTGCAGACATATCCGAATCCGTTGCGGTCGAATCCAGCTTACTCAGTTGTGAAGCAATATTTCGTGCACGTGGACGATACCGTTCCTCAGAAGGTTGTTGTTCACAAGGATAGTCCCAGGGGTGTGCATTTTCGACGTGCAGGGCCTCGACAAAAGGTGTATTTTAAATCGGATGATGTGCGGGCATGCATTGTTACTTGTGGTGGTCTGTGCCCTGGCCTCAACACCGTCATCAGGGAAATTGTCTGTGGCCTTTCTTACATGTACGGTGTCAACAGTGTTATTGGCATAGATGGTGGTTATAGAGGATTTTATTCAAAAAACACCGTTACCTTAACACCTAAGGTGGTCAATGATATCCATAAACGTGGGGGTACGTTTCTTGGGACATCACGAGGAGGGCATGATACTAACAAGATAGTTGACAGCATCCAGGATCGTGGAATAAATCAGGTTTATGTTATTGGAGGTGATGGAACACAGAGAGGAGCAGCTGTGATTTATGAGGAAATTAGACGGAGAGGGCTGAAAGTAGCAGTAGTTGGGATTCCTAAAACCATAGACAATGACATCCCGGTCATTGACAAGTCATTTGGTTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACACGTTGAAGCTGAAAGTGTTGAGAATGGCATTGGCATTGTAAAGCTTATGGGGCGCTATAGTGGTTTTATTGCAATGTATGCTACTCTTGCTAGTAGAGACGTGGACTGTTGCCTGATTCCAGAGTCACCCTTCTTCCTTGAAGGAAATGGTGGGCTGTTTGAATTTATTGAGAAGAGGCTAAAAGAAAACGGTCATATGGTTATAGTTATAGCAGAGGGGGCTGGTCAAGATCTTCTTACAGAGGAAAATGCTCAAGCCATGAATGCAAAAGATGCTTCTGGAAACAAGCTACTTCAAGACGTTGGTCTATGGATATCCCAAAGGATCAAGGATCATTTTGCCAGGAAAAATAAGATGGCTATCACTCTTAAATATATAGATCCCACTTACATGATACGTGCAGTTCCAAGTAATGCATCAGACAATGTCTACTGTACGCTTCTTGCTCAGAGTGCAGTTCATGGAGCAATGGCTGGGTTTACTGGATACACAAGTGGGCTTGTCAATGGAAGACAAACTTATATTCCATTCCAAGTAAGTTACTTACTCCATATACCTACACAGGTTCTGAATTGTTTTATAACTTAG 1419 0.4264 MASSDANMKIVHGEAGYILEDVPHLSDYIPNLPVHLSLSLSLSLSLSQVTVDDYDFLFFLFFLQTYPNPLRSNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGVHFRRAGPRQKVYFKSDDVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVNSVIGIDGGYRGFYSKNTVTLTPKVVNDIHKRGGTFLGTSRGGHDTNKIVDSIQDRGINQVYVIGGDGTQRGAAVIYEEIRRRGLKVAVVGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESVENGIGIVKLMGRYSGFIAMYATLASRDVDCCLIPESPFFLEGNGGLFEFIEKRLKENGHMVIVIAEGAGQDLLTEENAQAMNAKDASGNKLLQDVGLWISQRIKDHFARKNKMAITLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGFTGYTSGLVNGRQTYIPFQVSYLLHIPTQVLNCFIT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00860 472 Coils Coil 266 286 - -
Adu08g00860 472 PRINTS ATP-dependent phosphofructokinase family signature 210 226 IPR022953 GO:0003872|GO:0006002|GO:0006096
Adu08g00860 472 PRINTS ATP-dependent phosphofructokinase family signature 261 279 IPR022953 GO:0003872|GO:0006002|GO:0006096
Adu08g00860 472 PRINTS ATP-dependent phosphofructokinase family signature 243 260 IPR022953 GO:0003872|GO:0006002|GO:0006096
Adu08g00860 472 PRINTS ATP-dependent phosphofructokinase family signature 282 298 IPR022953 GO:0003872|GO:0006002|GO:0006096
Adu08g00860 472 PRINTS ATP-dependent phosphofructokinase family signature 126 145 IPR022953 GO:0003872|GO:0006002|GO:0006096
Adu08g00860 472 PRINTS ATP-dependent phosphofructokinase family signature 339 351 IPR022953 GO:0003872|GO:0006002|GO:0006096
Adu08g00860 472 PIRSF ATP_PFK_TP0108 8 462 IPR012004 GO:0003872|GO:0005524|GO:0006096
Adu08g00860 472 Gene3D - 119 308 - -
Adu08g00860 472 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 22 471 IPR012004 GO:0003872|GO:0005524|GO:0006096
Adu08g00860 472 SUPERFAMILY Phosphofructokinase 60 455 IPR035966 GO:0003872|GO:0006096
Adu08g00860 472 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 58 454 - -
Adu08g00860 472 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 5 35 - -
Adu08g00860 472 PANTHER - 58 454 - -
Adu08g00860 472 Pfam Phosphofructokinase 125 431 IPR000023 GO:0003872|GO:0006096
Adu08g00860 472 PANTHER - 5 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00860 Adu-Chr8 16040870 16046358 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00860 K00850 - gmx:100803139 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00860 08 16040870 16046358 Adu08g00860 08 16040870 16046358 ECH