Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00845 ATGACATCGTCTAAGAGGCCAAATGCGGAGCCAAATGGGAAAGCGAAACGCCAAAAGTCAGGAACTGGTTTTTCGCCGTTGGATTTTGCTCCGGGGAGTGTTGTTTTCCGGTTGCTCTGCTCCGCGTCAAGGATTGGGAGTGTTATCGGCAAAGGTGGTGCCACCGTGACACAAATCCGACAGGAGACTGGTGTGAAGGTTAAGATTGAGGAAGCTGTACCTGGATGTGATGAGAGGGTTATTACTATTTTAGGTTCTGATAAGGAGACTGAGGAAGTCACTGACCAAGGAAGGGAGGTTAATAACAATAACAACAACAATAAAAATGATGATGATGAAGCTGAGAGCAAGGAGAAGGAGATTGGGGCAAAAGACGATGCACACAATGATGAAGATAAGGGGTCTGTTCCGGTTGAAGATTTGAAGAGTGAGAAGGGGAATTCTGCCATTCGGAAGGCTCTCTCGCTGGTTTTTGAGAAGATGGTTGAAGGAATGGAGGAGACAACAGAGGGGGATAAAGAAGGTAGTAAATCTTTGTCCTTTGTTTTTAGGCTACTTGTCCTTTCTAGTCAAGTTGGATGCCTTCTGGGGAAAGGTGGTAGCGTAATAAAGCAAATGTCAGCTGATAGTGGGGCACAGATTCGGATCCTTCCAAGGGACAAACTTCCACTGTGTGCGTCGGATTCTGATGAGCTTGTTCAGATCACAGGGGGAATCGACGTCGTCAGGAAAGCTCTTCAATCTGTTTCTCAACAACTTTTGGAAAATCCACCTCGGGATCATGAACCTCTTCGTGCCAATCCTACAGGACCATCTTCTCATTCAGCTGGTCAATTCCCACCACATAACCGTTCTCTTGCTGCACAAGGAGCGCCTTTTGCTGCAGGACCACGTGATATTTCTGTTTTTCATCCTGGTCCTCCTGTAATTCCCAAATTTCATGAAGGTGCCATACATGGACGCATGAGGCCTTCACAGGAGATGCTTACTTTCCGTTTATTGTGTCATGCTGAAAGAGTAGGAAATGTTATTGGTAAAGGTGGAGCAATCATAAAGGCTGTGCTGAACTATTGTTATGGAGCTAGCAGAATAGGAAGGTCTATACCTGATCCCAAAGAGCATAATATGTTAGCTAGGCTTCTTGTTTCTTCCAATCAAATAGGTTGTCTCCTTGGCAAGGGTGGTTCCATCATAACCGAAATGAGGAAGTTATCAGGGGCCCATATCCGTATATTAGGCAAGGATAAGGTTCCAAAGTGTGCTTCAGAAGATGAAGAAGTAATTCAGATAAGTGGAGAAGTCGAGGCAGTGCACGATGCACTTCTGCAAGTAACCACAAGACTAAGACATCATTTCTTTCGTGATGCATTTCCATCTATCAATTATCCTTCCAATTCTCCATTTCTAGATCAAGGTCCTCCATTCCCACCGTACTTTGGAAGGCGAGGACTTTCACCACCAGGGATGTATTCTAATCTAGGTCCACCTCCACACGGGGGTTTTCCTCTTGATGATGGTCCTCCTTTTATTAATAATATACGCAGACCAGGCATTCCTCCTCATTTATCCGAAAGAAAGCCTTGGGGTCCTCAGGGGTTACTAGAAGGTGGTGGACCCATGGGCTTACCAGACTTTCCAGGAGGCCCTCATAGGAGAATTCCAGGATTTGCAAGTGGGGGCCAACCAATTATCACTAGTACCACTGTTGAAGTAGTTGTTCCTCGAAAGCTTGTGCCTGTAATTTATGGGGAGGATGGTGAATGCCTAAAACAAATACTTGAGATCTCTGACGCAAATATCAAATTTATGGATCCAAAGCCTGGAGCTGTGGAAACCAAGATTATAATATCAGGAACCCCGGAGCAAACTCATGCTGCCCAAAGTCTTATTCAGGCGTTTGTCTTGAATGAGACAGAGTCTGGTTGA 1926 0.4528 MTSSKRPNAEPNGKAKRQKSGTGFSPLDFAPGSVVFRLLCSASRIGSVIGKGGATVTQIRQETGVKVKIEEAVPGCDERVITILGSDKETEEVTDQGREVNNNNNNNKNDDDEAESKEKEIGAKDDAHNDEDKGSVPVEDLKSEKGNSAIRKALSLVFEKMVEGMEETTEGDKEGSKSLSFVFRLLVLSSQVGCLLGKGGSVIKQMSADSGAQIRILPRDKLPLCASDSDELVQITGGIDVVRKALQSVSQQLLENPPRDHEPLRANPTGPSSHSAGQFPPHNRSLAAQGAPFAAGPRDISVFHPGPPVIPKFHEGAIHGRMRPSQEMLTFRLLCHAERVGNVIGKGGAIIKAVLNYCYGASRIGRSIPDPKEHNMLARLLVSSNQIGCLLGKGGSIITEMRKLSGAHIRILGKDKVPKCASEDEEVIQISGEVEAVHDALLQVTTRLRHHFFRDAFPSINYPSNSPFLDQGPPFPPYFGRRGLSPPGMYSNLGPPPHGGFPLDDGPPFINNIRRPGIPPHLSERKPWGPQGLLEGGGPMGLPDFPGGPHRRIPGFASGGQPIITSTTVEVVVPRKLVPVIYGEDGECLKQILEISDANIKFMDPKPGAVETKIIISGTPEQTHAAQSLIQAFVLNETESG 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00845 641 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 28 89 IPR036612 GO:0003723
Adu08g00845 641 ProSiteProfiles Type-1 KH domain profile. 375 444 - -
Adu08g00845 641 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 362 498 - -
Adu08g00845 641 Gene3D K Homology domain, type 1 565 638 IPR036612 GO:0003723
Adu08g00845 641 CDD PCBP_like_KH 35 86 - -
Adu08g00845 641 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 566 636 IPR036612 GO:0003723
Adu08g00845 641 MobiDBLite consensus disorder prediction 252 288 - -
Adu08g00845 641 Coils Coil 100 120 - -
Adu08g00845 641 MobiDBLite consensus disorder prediction 1 26 - -
Adu08g00845 641 CDD KH-I 568 631 - -
Adu08g00845 641 Gene3D K Homology domain, type 1 32 102 IPR036612 GO:0003723
Adu08g00845 641 MobiDBLite consensus disorder prediction 105 144 - -
Adu08g00845 641 MobiDBLite consensus disorder prediction 87 144 - -
Adu08g00845 641 SMART kh_6 374 449 IPR004087 GO:0003676
Adu08g00845 641 SMART kh_6 32 102 IPR004087 GO:0003676
Adu08g00845 641 SMART kh_6 565 635 IPR004087 GO:0003676
Adu08g00845 641 SMART kh_6 179 254 IPR004087 GO:0003676
Adu08g00845 641 ProSiteProfiles Type-1 KH domain profile. 180 249 - -
Adu08g00845 641 ProSiteProfiles Type-1 KH domain profile. 566 630 - -
Adu08g00845 641 CDD PCBP_like_KH 182 250 - -
Adu08g00845 641 Pfam KH domain 379 444 IPR004088 GO:0003723
Adu08g00845 641 Pfam KH domain 36 93 IPR004088 GO:0003723
Adu08g00845 641 Pfam KH domain 183 249 IPR004088 GO:0003723
Adu08g00845 641 Pfam KH domain 568 631 IPR004088 GO:0003723
Adu08g00845 641 MobiDBLite consensus disorder prediction 268 282 - -
Adu08g00845 641 ProSiteProfiles Type-1 KH domain profile. 33 100 - -
Adu08g00845 641 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 362 498 - -
Adu08g00845 641 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 2 354 - -
Adu08g00845 641 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 174 258 IPR036612 GO:0003723
Adu08g00845 641 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 370 454 IPR036612 GO:0003723
Adu08g00845 641 CDD PCBP_like_KH 379 445 - -
Adu08g00845 641 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 2 354 - -
Adu08g00845 641 Gene3D K Homology domain, type 1 178 258 IPR036612 GO:0003723
Adu08g00845 641 Gene3D K Homology domain, type 1 372 452 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00845 Adu-Chr8 15748218 15751903 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00845 K21444 - gmx:100777433 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00845 08 15748218 15751903 Adu08g00845 08 15748218 15751903 ECH