Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00825 ATGTCACTGCCAGTATTTAGCATAGTGGGGGAGGAGGAGGGCAAAAGCAATGTCACTTTGTTGGTTTCGTCGACTGCCATGGAATGTGCTCGCATCGAGAGCTCCGAGTTGAAAGTGCGAAACTACATGGAATTGTCTGGTTGTTCTTCTGCTGACAGCTCGGTTTCGCCCTTACCGGACGAGCATAAAAGTAATCTGAATCTGAAAGCTACTGAACTCAGGCTTGGTCTCCCGGGATCTCAGTCTCCTGAGAGAGATTCTGATCATTGCTTAAGAAGCTCAACTCAGTTTGATGAGAAACCACTTTTCCCCCTGTGCCCCTCGACCGATGATCATCATCATTCCCCTGCAAAGGCTGCTGTTTTGGGTAACAAAAGAGGATTCTTAGATGTAATGAATGGGTTCCAGAAGGGGAATTTTTTATCTAATTCAGAAGTGAATACAATTCTGTCGCCGAGGCCTTCTTCTAACTTAGGATTAAAACCTGGTTCTCTGCTTCAGAGTCTTGGGGTTCAACAAGCCAAAATGAAAGAAGTATCGACTACAAAGGTTGGGGTCGAGAAGCCTCATGCTTTCAATGAGACCAGACCCAGTCTTAATGGTTCTGCGAATAATAATAGCAGTGCACCAGCTACCAAGGCTCAGGTCGTGGGGTGGCCTCCCCTAAGGTCATTTAGGAAGAATTCACTGGCAACTAATTCGAAAAACACAGAAGAAGTAGATGGACAACCGGGGTCCGGTCCACTGTTTGTCAAGGTCAGCTTGGAGGGTGCTCCCTATTTAAGGAAAGTAGACTTGAAGAATTACTCTACATACCCGGAACTATGTTCTGCTCTAGAGAAGATGTTCCGCGGTTTTACTATAAGTAAGGAAGAATTCGTTTGA 885 0.4565 MSLPVFSIVGEEEGKSNVTLLVSSTAMECARIESSELKVRNYMELSGCSSADSSVSPLPDEHKSNLNLKATELRLGLPGSQSPERDSDHCLRSSTQFDEKPLFPLCPSTDDHHHSPAKAAVLGNKRGFLDVMNGFQKGNFLSNSEVNTILSPRPSSNLGLKPGSLLQSLGVQQAKMKEVSTTKVGVEKPHAFNETRPSLNGSANNNSSAPATKAQVVGWPPLRSFRKNSLATNSKNTEEVDGQPGSGPLFVKVSLEGAPYLRKVDLKNYSTYPELCSALEKMFRGFTISKEEFV 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00825 294 Gene3D - 245 293 - -
Adu08g00825 294 MobiDBLite consensus disorder prediction 228 248 - -
Adu08g00825 294 MobiDBLite consensus disorder prediction 195 213 - -
Adu08g00825 294 Pfam AUX/IAA family 70 290 IPR033389 -
Adu08g00825 294 MobiDBLite consensus disorder prediction 192 214 - -
Adu08g00825 294 ProSiteProfiles PB1 domain profile. 248 294 IPR000270 GO:0005515
Adu08g00825 294 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 23 290 IPR003311 GO:0005634|GO:0006355
Adu08g00825 294 PANTHER AUXIN-INDUCED PROTEIN 23 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00825 Adu-Chr8 15205681 15209029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu08g00825 AUX_IAA 1.5e-41 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00825 K14484 - gmx:100815447 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00825 08 15205681 15209029 Adu08g00825 08 15205681 15209029 ECH