Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00775 ATGCGCTACACCGGGAATCTAGGGTTTTCGAGCCTGGTCCTTTTGGTGCTGTTGCTGCTGCTGATTTGTCTTGTTTTTCCGGCGATCGGATTCTTTTATGTCCGCCGTAAATGGCGGATTTCAGTGGCTAGGAAGGAAGAGATCAGGAGGCTTCTGATTTTGGCTGCTGAGGAAACTGCCAGGGCCGAGAGAGAGGCCACGTATGGTTACGGTGCCGCGGCGGAAACCGCCGTCAAAAGCAATCAGTGTGCCGTGTGCTATGTTCCCGCCACCGCACGCTGCGCTCAGTGCAAATCGGTTCGCTACTGTTCGTTTGAGTGTCAAACTCTTCATTGGCGCCAAGGGCACAAATTGGAATGCCGTCTGCAAAGAATACTTCGGCAGAGTGATGTAGTTAGTGATCTTGGCAACAAGGTAACCGAGCAAGAATTCTCTAGAATCGCTGACCAGAAGTCTGAAATTGCAGGTGCAGAGCATGAAGCGTCCGGTGAAAACCAACAAACTTCAGTCGCTGGTGTTTCTTCTAAAGTTTTATATGGAAAAAATGAAAATGTAAGAGATGAGTGCCTTGCAGGGGGAACTATAACAGATTCTAATTCTGAGTTGTCAAGTAACTCTTTTTCTGGCTTCTCAGCTTCTCCAAGTGCTAGTGAATCATCTGATGACTCCTCTATTTGTGAGAGTGTTATATCAAACGAGCATGACCAATCTGATGGACCAGTTTTTGTTGATTCGACACTTGACATTCCAGATAGCACTTCAAGTGACGGTAGCATGGTTGTAGCTATGTCTTCATCACCCAAATTTGCCAGTTTGGTTGAATCAGTTGATGGTTTTTCGACAATGCGTAAATTAAATGGAAGTAGATCTGGTCCTTGTAAAGAAGAAGGAAAACTTGCAAAAAATGGTACTTCAGGTTCAGGTATGCTGAAGGGGGCAACAATCAAGCCTTCCATAGTGTCTTCTGGGTTCTGGGATAGAACTCTTGGCACAACTGGGATTGAAGAAGATGCCAACAGTGACACTTCTCCATCCCATTCGGATGAATCCACTCACAATACAGGATCTGATTCTCAGTCATTTCGCTTTTCGTTTAGTTCCATCGCTCTTATGCAAGCACAAGATAGTGAGGCAAAGGATTTTGTATCTGATAATCCTTCTCCCAATACTGTTGGGGACAATGTGCCTTGCTCAGGATCAGCATCAACGGAGAATGACAGAGATACAGTGAATTCTTCAAAGGCTACAAATCTTAAATTCATGAACAGCAAAGATTCCATACTTCCAAACCCTGCTGCTGCCCCTGTTTATGAATCTGATCAATTGGGATCTAAAGGCAGCTCTGTGCAACCCTTATCTTGTCTCTACCCACCATCCCCCAGTCTTAGCAAAGGTTCAGGTTGTGAAGATTCTTTGAACGTCCATAACTTGCAATCGTATATTTCTATGGCATCAAATCGTGTTGTAGGAAACCATGGCATCAATTCTAAGTCTGCTGAAATTAGATGCCTGACACGTGACCTTGATTCTAATTTAGTCCGTAGAACTGATGCTCACTCAAATTCCAGTACAAAACATGTGAATAATGGTAATCAATCTGCCACTAGTACGTCGTCTGGGGGTGTTAGCTGTTCTGCAAATTCTAAGAGTGGCTTGAAATCATCTGTTTTAAAAGTTGTTGATCAGTTCCGAGGATCAAATTTCTCAAAGCAGTTTCCACTAGTTTGGAATGATACCGCAGGAAAACAAAGTGATAAGGGTCTTTTTCCTTACGAATTGTTTGTCAAGATTTATAACTCGAACAAGGGGGAGTTTAGCCCATTTGGTCTTATAAATTGTGGGAACAGCTGTTACGCCAATGCTGTACTCCAGTGCTTAGTATTTACACCACCCCTGACTGCATATTTTCTTCAAGGACTACATTCTAAAGCATGTGCAAATAAAAAATGTTTCAACTGTGAGTTTGAAAGTTTGATTTTGAAGTCAAAGGATACAAAATATCCACTCTCTCCTAAGGGCATACTCTCCCAACTAAGGAGAACTGGAAGTCAACTTGGTAATGGCAAAGAAGAAGATGCACATGAATTTCTAAGGCATGCCATTGACACAATGCAATCTGTTTGCCTTATGGATACTGGGGTTGATGTATGTGGTTCATTGGAAGAGGACACTACTTTAATTGGTCTAACATTCGGGGGTTACCTTAGATCAAAGATAAAATGCATGAAATGTGGAGGGAAATCTGAGCATCAGGAAAGGATGATGGATCTTACTGTTGAGATAGAAGGGGACATAGCAACCCTACAGGAAGCTCTTCGACGATTTACAAGTACCGAGTCTTTGGATGGAGAAAATAAGTACCACTGTGTCAGATGTAAATCTTATGAGAAGGCCAAGAAGAAGCTGACAATTTCTGAGGCACCTAATGTTCTTACAATTGCATTAAAGAGATTCCAGTCAGGAAAGTTTGGGAAGCTTAACAAGCCTATCCAGTTTCCTAAAACTCTTGACTTGGCTCCTTTCATGAGTGGGACTAGTGATAAATCACCTATATACAGACTGTATGGTGTAGTTGTTCACTTGGATATCATGAATGCTGCCTTTTCTGGTCACTATGTGAGCTATGTGAAGAATAGTCAAAACAAGTGGTTCAAGGTTGATGACAGTGTGGTGACACCTGTTGAGGTGGAGAGAGTCTTAACAAAAGGATCATATATGCTTTTTTATGCAAGGTGTTCACCCAAGGCCCCAAGATCAATCAGAGGCAAGACACTGTCCCCAGAATCAAAAGGCAAAGTAACCGGAAAGACCGCAACGAAAACTCGGAATGGTTCTTGCAGCACCGATAGCACTCATGATTCGACCACCACAGATGAGTTCTCCAATTATATTTTCGGTGATTCAAGGGTTGGCTGGGGTAGCCCATGGAGGAACTCCGAATCCGACACCTCATCCTCCACCTCTTCCTCATCTTCTCCCCTGAACTTCAGGCATTCACCCCTAGCCGATATGGACCGATATGATTCAGTTTCTCCTGGTTTAAGTGCAGATATAGATGGCAATTTGTACAGGAACAAAATGGGGCATGCAGAAAGAAAAGGAGGTGTTGTGCCTCTCTCACATTCAGACACTCTACACCATAGGAAGTTAGAAAGTACTAGGATTAGCAGCAACAGTAATTTTAGGGATACTAACTCTCATCAGAGACTAGGATCTAACCATTTTAATGGCATAAGCTCTGGTGCACCTTGTAGAAAGCCAAGGGACAGAACGGATTGA 3279 0.4309 MRYTGNLGFSSLVLLVLLLLLICLVFPAIGFFYVRRKWRISVARKEEIRRLLILAAEETARAEREATYGYGAAAETAVKSNQCAVCYVPATARCAQCKSVRYCSFECQTLHWRQGHKLECRLQRILRQSDVVSDLGNKVTEQEFSRIADQKSEIAGAEHEASGENQQTSVAGVSSKVLYGKNENVRDECLAGGTITDSNSELSSNSFSGFSASPSASESSDDSSICESVISNEHDQSDGPVFVDSTLDIPDSTSSDGSMVVAMSSSPKFASLVESVDGFSTMRKLNGSRSGPCKEEGKLAKNGTSGSGMLKGATIKPSIVSSGFWDRTLGTTGIEEDANSDTSPSHSDESTHNTGSDSQSFRFSFSSIALMQAQDSEAKDFVSDNPSPNTVGDNVPCSGSASTENDRDTVNSSKATNLKFMNSKDSILPNPAAAPVYESDQLGSKGSSVQPLSCLYPPSPSLSKGSGCEDSLNVHNLQSYISMASNRVVGNHGINSKSAEIRCLTRDLDSNLVRRTDAHSNSSTKHVNNGNQSATSTSSGGVSCSANSKSGLKSSVLKVVDQFRGSNFSKQFPLVWNDTAGKQSDKGLFPYELFVKIYNSNKGEFSPFGLINCGNSCYANAVLQCLVFTPPLTAYFLQGLHSKACANKKCFNCEFESLILKSKDTKYPLSPKGILSQLRRTGSQLGNGKEEDAHEFLRHAIDTMQSVCLMDTGVDVCGSLEEDTTLIGLTFGGYLRSKIKCMKCGGKSEHQERMMDLTVEIEGDIATLQEALRRFTSTESLDGENKYHCVRCKSYEKAKKKLTISEAPNVLTIALKRFQSGKFGKLNKPIQFPKTLDLAPFMSGTSDKSPIYRLYGVVVHLDIMNAAFSGHYVSYVKNSQNKWFKVDDSVVTPVEVERVLTKGSYMLFYARCSPKAPRSIRGKTLSPESKGKVTGKTATKTRNGSCSTDSTHDSTTTDEFSNYIFGDSRVGWGSPWRNSESDTSSSTSSSSSPLNFRHSPLADMDRYDSVSPGLSADIDGNLYRNKMGHAERKGGVVPLSHSDTLHHRKLESTRISSNSNFRDTNSHQRLGSNHFNGISSGAPCRKPRDRTD 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00775 1092 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 609 624 IPR018200 GO:0004843|GO:0006511
Adu08g00775 1092 Coils Coil 45 65 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 285 313 - -
Adu08g00775 1092 Gene3D Cysteine proteinases 601 922 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 975 997 - -
Adu08g00775 1092 Pfam Ubiquitin carboxyl-terminal hydrolase 608 909 IPR001394 GO:0004843|GO:0016579
Adu08g00775 1092 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 25 935 - -
Adu08g00775 1092 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 943 1072 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 200 239 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 1054 1079 - -
Adu08g00775 1092 SUPERFAMILY Cysteine proteinases 606 914 IPR038765 -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 516 542 - -
Adu08g00775 1092 Gene3D - 73 122 - -
Adu08g00775 1092 SUPERFAMILY HIT/MYND zinc finger-like 78 123 - -
Adu08g00775 1092 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 608 912 IPR028889 -
Adu08g00775 1092 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 943 1072 - -
Adu08g00775 1092 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 25 935 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 917 958 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 333 358 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 1051 1092 - -
Adu08g00775 1092 Coils Coil 147 167 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 376 411 - -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 930 958 - -
Adu08g00775 1092 ProSitePatterns Zinc finger MYND-type signature. 83 120 IPR002893 -
Adu08g00775 1092 Pfam MYND finger 83 120 IPR002893 -
Adu08g00775 1092 ProSiteProfiles Zinc finger MYND-type profile. 83 120 IPR002893 -
Adu08g00775 1092 MobiDBLite consensus disorder prediction 200 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00775 Adu-Chr8 14074076 14079993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00775 588 930 Miscellaneous Gene Families AT4G31670 48.696 3.87e-114 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00775 K11855 - gmx:100795674 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00775 08 14074076 14079993 Adu08g00775 08 14074076 14079993 ECH