LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g00771	ATGGCTTCCATCTCCGGCATTTGTTCATCTTCCTATGCTCTCAAGCTCCGAAATCGGAATCATTCTCCGGCGTTGACCAACCCGTTCCGGAACGGACCGGAGCTGGCCGCGTTCCCGAGCAGACCAAAACTCGGTTCGGATCGGGCCCTAAGCCTCGTGTCAGTGGCTCGGGAGGTGTCTCCGGTCACCAACGACGGCGCGGATGCCGCGGTACCGGCGGCGAAGGGGTTCAAGAAGAAGACAGCGTTGGAGAAGGATCCGAGGGAGCTATGGAAGAGGTACGTGGAGTGGCTGTACCAACACAAGGAGGTTGGAATGTACTTGGATGTGAGTCGGGTCGGGTTTACCGACGAGTACGTGGCGGAGATGGAGCCGCGGTTCCAGGCTGCGTTCAAGGCCATGGAGGAGCTCGAGAAAGGTGCGATTGCGAACCCCGATGAGGGACGCATGGTTGGTCATTACTGGCTTAGGGATTCTAACCGCGCACCTACCACGTTCTTGAAATCTCAGATTGATAACACTCTTGTTGCTATTTGCAATTTCGCCGATGATGTCCTCACTGGTAAGATTAAGCCTCCCTCGTCGCCGGAGGGTCGGTTTACTCAGATACTGTCTGTTGGAATTGGGGGTTCAGCTCTTGGCCCACAGTTTGTTGCGGAGGCATTGGCTCCTGATAATCCTTTGCTCAAGATAAGGTTTGTGGACAACACAGATCCCGCTGGAATTGATCATCAAATTGCACAACTTGGTCCTGAGCTAGCTTCAACACTTGTAATAGTCATTTCAAAGAGTGGAGGTACTCCTGAGACTCGAAATGGTTTATTAGAAGTACAGAAGGCCTTTCGTGAAGCAGGCTTGGATTTTCCGAAACAGGGTGTTGCTATAACACAAGAAAACTCTTTGTTAGATAACACTGCCAGAATTGAGGGCTGGTTAGCTAGATTTCCTATGTTTGATTGGGTGGGAGGTAGAACGTCAGAGATGTCTGCTGTAGGCCTGCTTCCAGCGGCCCTTCAGGGCATTGACATTAGAGAAATGCTTGCTGGTGCAGCATTGATGGATGAGGCAACTAGAACTACTGTGTTAAGGAGTAATCCTGCGGCGCTGCTGGCTCTATGTTGGTATTGGGCTACAGATGGAGTAGGATCCAAGGATATGGTCATCCTTCCGTATAAGGATAGCCTGTTATTGTTTAGTAGATACTTGCAGCAGCTAGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGATGGGAATCGGGTCAATCAGGGAATTAGTGTCTATGGAAATAAAGGAAGTACCGATCAGCATGCGTATATTCAACAACTGAGGGAGGGTGTACACAATTTCTTTGTGACATTCATTGAGGTGCTCCGCGATAGACCTCCGGGTCACGATTGGGAACTTGAACCTGGTGTCACATGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCTTTATATGCTAACGAGCGAGAGTCAATCACAGTCACCGTACAAGAAGTGACCCCAAAATCAGTTGGTGCTCTTATTGCACTATATGAGCGTGCAGTAGGGATATATGCCTCCCTTGTCAACATAAATGCTTATCATCAACCTGGTGTCGAAGCCGGAAAGAAAGCGGCAGGCGAAGTATTGGCTCTTCAGAAGCGGGTTTTGGCCGTGTTAAATGAGGCAAGCTGCAAACAGCCTATTGAGCCATTAACGCTCGATGAAGTAGCCGATCGTTGCCATGCGCCAGAAGATATTGAAATGATTTACAAGATTATTGCTCACATGGCTGCCAATGACAGAGCACTTATCGCTGAAGGCAGCTGTGGTTCACCACGGAGTTTCAAGGTTTTTCTTGGAGAGTGTAACGTTGATGAATTGTATGCTTGA	1890	0.4931	MASISGICSSSYALKLRNRNHSPALTNPFRNGPELAAFPSRPKLGSDRALSLVSVAREVSPVTNDGADAAVPAAKGFKKKTALEKDPRELWKRYVEWLYQHKEVGMYLDVSRVGFTDEYVAEMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRDSNRAPTTFLKSQIDNTLVAICNFADDVLTGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPLLKIRFVDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGIDIREMLAGAALMDEATRTTVLRSNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANERESITVTVQEVTPKSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKQPIEPLTLDEVADRCHAPEDIEMIYKIIAHMAANDRALIAEGSCGSPRSFKVFLGECNVDELYA	629

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g00771	629	ProSitePatterns	Phosphoglucose isomerase signature 2.	525	542	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	PRINTS	Glucose-6-phosphate isomerase signature	203	222	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	PRINTS	Glucose-6-phosphate isomerase signature	315	333	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	PRINTS	Glucose-6-phosphate isomerase signature	391	412	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	PRINTS	Glucose-6-phosphate isomerase signature	493	511	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	PRINTS	Glucose-6-phosphate isomerase signature	511	525	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	PRINTS	Glucose-6-phosphate isomerase signature	525	538	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	CDD	SIS_PGI_2	384	548	IPR035482	-
	Adu08g00771	629	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	81	558	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	629	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	Hamap	Glucose-6-phosphate isomerase [pgi].	103	552	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	SUPERFAMILY	SIS domain	81	552	IPR046348	GO:0097367\|GO:1901135
	Adu08g00771	629	Pfam	Phosphoglucose isomerase	491	550	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	Pfam	Phosphoglucose isomerase	133	459	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Adu08g00771	629	Gene3D	-	153	338	-	-
	Adu08g00771	629	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	629	-	-
	Adu08g00771	629	CDD	SIS_PGI_1	172	338	IPR035476	-
	Adu08g00771	629	Gene3D	-	339	534	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g00771	Adu-Chr8	13985458	13990935	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g00771	K01810		-	gmx:100791285	1072.38

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu08g00771	08	13985458	13990935	Adu08g00771	08	13985458	13990935	ECH