Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00748 ATGAAGAAGAGAGTCCCCTGCTACACCAACCACACGACGAAGCCACTCTCATACAACGAACATGCTCCGAATCAAACAGCCTCTGGCAAATTGCTGCCCCTTCCATCCGGCCACCTCTCCGACATCGACCTCGCCGCCTTCTCAATTTCTTGCACCGTTCTCATCTCCATCACCTTCGGATTCTTGCTGGGCATGGCGAGCGCGCTTGAAACCCTCTGCGGCCAAGCTTACGGTGCCAGAAAGCATCACATGCTGGGAATCTACCTGCAACGCTCGTGGCTCCCTTCAGCGGTTGCGGAACGCACCGGTTTGGTTGCCATATGGCTGATCCCTCTTCACCTCAGCTTTCCCTTCCAATTCTCGCTGCAAAGATTCTTGCAGTGTCAACTTAAGACACGTGTCGCGGCGTGGATGGCAGGTGTTTCGCTTGCCATCCACGTGGCAGTGAGTTTGGTTTTTGTGTCCAAGATGAAGGTTGGGATTGTTGGCGCTGCGCTTTCTATTGGGTTCTCGTGGTGGGTTTCGGTTGTGGGAATGCTTTCGTACACTCTCTTTGGTGGGTGTAAAGATACATGGACTGGTTTCTCTTCTGAAGCTTTTCTTGGACTCTGGGAATTCTTCAAGTTATCTTTTGCTTCTGGCATCATGCTTCTGTTAGAGAATTTCTATTACAGGTTGTTGCTTATAATGTCGGGTTATATGGACAACTCTGAGGTTGCTATCGATGCTCTTTCGGTTTGTAATACTATTTATGCTTGGGAATCCATGATACCTCTTGGATTTTTGGCTGCATCCGGGGTGCGTGTAGCAAATGAGCTTGGCGCAGGCAACGCAAAAGGGGCAAAATTTGCAACAGCTATTTCATTGCTAAACACTGTGGTGGTGGGATTTATATTTTGGTTGATAATTATGATCTTCAATGAGAATCTTGCTTTGATCTTTACCTCAAGCTCCGCTATTGTCCAAATGGTCAATGAGCTGTCAATCATGTTGGCTTTTACAATTCTGATTAATTGCCTCCAACCTGTTCTTTCAGGGGTAGCAGTGGGATGTGGAAATCAAGCAATAGTGGCATACGTTAACATTGCAAGTTACTATTTGATGGGAATGCCTCTTGGGATCCTCCTAGGCTGGTTGCTGCCTTCGGGTATTATTGGTATGTGGACGGGAATGTTGAGTGGAACGGTGGGTCAAACGTTGATTTTGATCGTTATTACGATGAGATGTGATTGGGATAAAAAGGTACTGAAAGCTCAAGTTCTTGTCAAGGAGAAAGCACTAGTCTCCAACCAGTAA 1296 0.4699 MKKRVPCYTNHTTKPLSYNEHAPNQTASGKLLPLPSGHLSDIDLAAFSISCTVLISITFGFLLGMASALETLCGQAYGARKHHMLGIYLQRSWLPSAVAERTGLVAIWLIPLHLSFPFQFSLQRFLQCQLKTRVAAWMAGVSLAIHVAVSLVFVSKMKVGIVGAALSIGFSWWVSVVGMLSYTLFGGCKDTWTGFSSEAFLGLWEFFKLSFASGIMLLLENFYYRLLLIMSGYMDNSEVAIDALSVCNTIYAWESMIPLGFLAASGVRVANELGAGNAKGAKFATAISLLNTVVVGFIFWLIIMIFNENLALIFTSSSAIVQMVNELSIMLAFTILINCLQPVLSGVAVGCGNQAIVAYVNIASYYLMGMPLGILLGWLLPSGIIGMWTGMLSGTVGQTLILIVITMRCDWDKKVLKAQVLVKEKALVSNQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00748 431 PANTHER MULTIDRUG RESISTANCE PROTEIN 36 94 - -
Adu08g00748 431 PANTHER MULTIDRUG RESISTANCE PROTEIN 95 417 - -
Adu08g00748 431 PANTHER PROTEIN DETOXIFICATION 36 94 - -
Adu08g00748 431 TIGRFAM matE: MATE efflux family protein 116 388 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu08g00748 431 MobiDBLite consensus disorder prediction 1 21 - -
Adu08g00748 431 PANTHER PROTEIN DETOXIFICATION 95 417 - -
Adu08g00748 431 CDD MATE_eukaryotic 37 417 IPR045069 GO:0042910|GO:1990961
Adu08g00748 431 Pfam MatE 214 374 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu08g00748 431 Pfam MatE 37 111 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00748 Adu-Chr8 13496304 13501059 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00748 K03327 - gmx:100814869 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00748 08 13496304 13501059 Adu08g00748 08 13496304 13501059 ECH