Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00697 ATGTTGAGGATCCCGGACAACAACAACACCAATAGAAGGAACAACCTTGAAACTACCAGGAATCGCAGAGACGACAATGAATCTTCCTTGTTCGGTGTCGTTCCCAATAACACCTCGCCGCCATTGATGAATCTTCGCCCCGACCACGTTGCCGTCGGCTCACCTCTCACCAACAGAGCCCCTTTCACCACCACCAACAACAACAACGCCGCCGCCTCTCGTTTCGACGGTGGCCCTGTCGGCAGTTCTCCTTATCCAGCTCAGTTTCGCGGCGACCACTGTCTCTGGATGGACACCGATCAGACGTCGGGATTCCACGTGGCAAACACCACCTTCGGCGCCGACAAATGGGTCGACGATCTGGGAGGAGGAGGAAACGCACTGGCGAACAACTTGTCAAGAATGAGCATCGTCGAAAACGGAACCACGAAAAGCAGAAGCCCATACGACGTCGTGGAGGCTTACAGCAACAACAGCGCATGCTCCATTGATTCCAATAACCTCCCTTTCTTCGATGAAACAGCACCGCCGCCATTCTGCAACGCCGCTGCTGGGGTTCCCGTATCGGTGACCCCGGGTTTTGTTCCCAAAGGTTACGCTTTTGAAGCTTCTCCAATGGCTGCGCAGCATCATGATCACCATGTGTACCATCACCATCATCACATCATGGACCAGAGGATGATGAAACAGGCTACAAGCGATAACAACCTTCATCAGTTGCAGCAGAAGCCGCAGCAGCAGCCGCCGCCAACACCGGCTTTCGTAAACCCTTACGTTTGTGACCGTTTCGTTGGGTCTCATCAGCAGCATTTCGGCGTCGAGTGTGAACCTCCCAATGGATGGGGCGGCGGCGTCAAGAACCCCTTCAGATTCTCTCAGATAATGCACCCTAGGCTCCCAGCGAATGCGCCCAGGGATATGGCGGCAATGGCAGTTGCTGCTGCCGCCGCCGCCGCTAACAGCGGTGAGTTTCCTCAGTGTATTTCTCCGATGAGAAATGGTGGTGACCGTGCTGCCTTTAGATGCGATAACAGCGTCATTATTCAAGGAAGAGAAATGGTAAAACCCTGCGTGGAAAGCACTGGTTACGGTGGTTCCGTAAGAGGTTTCAAGAAGGGTCACGGTCAAGGACAGGTTCCATGCGATGAGCTTCATCATCATTATCATCATAATAATAATGGCCAAGGTGGTGGTGGTGGTGGTGGAAACAACAACAATAACACCAACAACAACAATGGCGGTTTCGTGAGGGATCCATCGTCGGTGCCATTGATGCTGGATTTCTATAACCTAGCTGAGGCGCAGGGTTACGTGTACAACATGGCGAAGGACCAGAACGGTTGCAGGTTTTTGCAGAGGATGGTTGAAGAAGGCACCTTTGAGGATGTAAGGGTGGTTTTTGAAGGGATCGTTGAGAATGTTGTGGAGCTCATGATGGACCCTTTTGGTAACTACCTTGTTCAGAAGCTTCTAGATGTTTGCAATGAAGATCAAAGGTTGCAAATTGTTCTCATGCTCACTAAAGAACAAGGCCAGCTTGTCCGAATCTCCTTGAATACCCACGGCACGCGCGTGGTGCAGAAGCTGATTGAGACCCTCAACTCAGCGAAGCAAATTTCATTGGTGAAGGGTGCAATTCAACCAGGTTTCCTTGACCTTATTAAGGATCTCAATGGAAACCATGTCATACAACGTTGCTTGCAATGTCTTAGCTGTCAAGATAATGAGTTTATTTTTGAAGCTGGTGTAAAGTTTTGTGTTGACATAGCTACTCATCGACATGGATGCTGTGTACTACAACGTTGCATTGATTATTCCGTTGGAAAACATCGTGAGAGGCTGGTCGCAGAAATTTGCAAGCATGGTCTTCTCCTCGCTCAGGATCCATTTGGAAACTATGTTGTTCAGTATATTATAGAGATAGAGAACCCAACTGCCTCAACGAAATTGATGTCTCAGCTGAAAGGGAATTTTGTGAACCTGTCTACACAAAAATTCAGCAGCCATGTGGTTGAGAAATGCCTCAAGCATGTTGCAGATAGCAGGTCCAGAATTGTCCGTGAATTGCTCTCTACACCCCACTTTGAGCAGTTATTGCAAGACCCTTATGCCAACTACGTCATTCAATCTGCTCTTGCATATACCAAGGGTGCACTTCATGTATCATTGGTGGAAGCAGTTAGGCCATACAAGATCTTGCGCACTAGTCCATACTGCAAGAGGATATTCTCTGGAAGTCTACTTAAGAAGTGA 2253 0.4913 MLRIPDNNNTNRRNNLETTRNRRDDNESSLFGVVPNNTSPPLMNLRPDHVAVGSPLTNRAPFTTTNNNNAAASRFDGGPVGSSPYPAQFRGDHCLWMDTDQTSGFHVANTTFGADKWVDDLGGGGNALANNLSRMSIVENGTTKSRSPYDVVEAYSNNSACSIDSNNLPFFDETAPPPFCNAAAGVPVSVTPGFVPKGYAFEASPMAAQHHDHHVYHHHHHIMDQRMMKQATSDNNLHQLQQKPQQQPPPTPAFVNPYVCDRFVGSHQQHFGVECEPPNGWGGGVKNPFRFSQIMHPRLPANAPRDMAAMAVAAAAAAANSGEFPQCISPMRNGGDRAAFRCDNSVIIQGREMVKPCVESTGYGGSVRGFKKGHGQGQVPCDELHHHYHHNNNGQGGGGGGGNNNNNTNNNNGGFVRDPSSVPLMLDFYNLAEAQGYVYNMAKDQNGCRFLQRMVEEGTFEDVRVVFEGIVENVVELMMDPFGNYLVQKLLDVCNEDQRLQIVLMLTKEQGQLVRISLNTHGTRVVQKLIETLNSAKQISLVKGAIQPGFLDLIKDLNGNHVIQRCLQCLSCQDNEFIFEAGVKFCVDIATHRHGCCVLQRCIDYSVGKHRERLVAEICKHGLLLAQDPFGNYVVQYIIEIENPTASTKLMSQLKGNFVNLSTQKFSSHVVEKCLKHVADSRSRIVRELLSTPHFEQLLQDPYANYVIQSALAYTKGALHVSLVEAVRPYKILRTSPYCKRIFSGSLLKK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00697 750 ProSiteProfiles Pumilio RNA-binding repeat profile. 581 616 IPR001313 GO:0003723
Adu08g00697 750 MobiDBLite consensus disorder prediction 1 15 - -
Adu08g00697 750 SUPERFAMILY ARM repeat 431 743 IPR016024 -
Adu08g00697 750 MobiDBLite consensus disorder prediction 230 244 - -
Adu08g00697 750 Pfam Pumilio-family RNA binding repeat 694 715 IPR001313 GO:0003723
Adu08g00697 750 Pfam Pumilio-family RNA binding repeat 512 539 IPR001313 GO:0003723
Adu08g00697 750 Pfam Pumilio-family RNA binding repeat 473 503 IPR001313 GO:0003723
Adu08g00697 750 Pfam Pumilio-family RNA binding repeat 657 690 IPR001313 GO:0003723
Adu08g00697 750 Pfam Pumilio-family RNA binding repeat 550 580 IPR001313 GO:0003723
Adu08g00697 750 Pfam Pumilio-family RNA binding repeat 438 470 IPR001313 GO:0003723
Adu08g00697 750 Pfam Pumilio-family RNA binding repeat 624 652 IPR001313 GO:0003723
Adu08g00697 750 Pfam Pumilio-family RNA binding repeat 586 619 IPR001313 GO:0003723
Adu08g00697 750 MobiDBLite consensus disorder prediction 385 416 - -
Adu08g00697 750 PANTHER PUMILIO HOMOLOG 7, CHLOROPLASTIC-RELATED 406 750 - -
Adu08g00697 750 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 411 750 IPR033133 GO:0003723
Adu08g00697 750 ProSiteProfiles Pumilio RNA-binding repeat profile. 508 543 IPR001313 GO:0003723
Adu08g00697 750 CDD Pumilio 436 744 IPR033712 GO:0003723
Adu08g00697 750 MobiDBLite consensus disorder prediction 396 416 - -
Adu08g00697 750 ProSiteProfiles Pumilio RNA-binding repeat profile. 545 580 IPR001313 GO:0003723
Adu08g00697 750 MobiDBLite consensus disorder prediction 1 45 - -
Adu08g00697 750 ProSiteProfiles Pumilio RNA-binding repeat profile. 617 652 IPR001313 GO:0003723
Adu08g00697 750 SMART pum_5 690 725 IPR001313 GO:0003723
Adu08g00697 750 SMART pum_5 581 616 IPR001313 GO:0003723
Adu08g00697 750 SMART pum_5 469 504 IPR001313 GO:0003723
Adu08g00697 750 SMART pum_5 545 580 IPR001313 GO:0003723
Adu08g00697 750 SMART pum_5 508 543 IPR001313 GO:0003723
Adu08g00697 750 SMART pum_5 653 687 IPR001313 GO:0003723
Adu08g00697 750 SMART pum_5 617 652 IPR001313 GO:0003723
Adu08g00697 750 SMART pum_5 433 468 IPR001313 GO:0003723
Adu08g00697 750 ProSiteProfiles Pumilio RNA-binding repeat profile. 469 505 IPR001313 GO:0003723
Adu08g00697 750 Gene3D - 426 747 IPR011989 -
Adu08g00697 750 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 406 750 - -
Adu08g00697 750 ProSiteProfiles Pumilio RNA-binding repeat profile. 653 691 IPR001313 GO:0003723
Adu08g00697 750 ProSiteProfiles Pumilio RNA-binding repeat profile. 433 468 IPR001313 GO:0003723
Adu08g00697 750 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00697 Adu-Chr8 12673051 12677341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00697 - - aip:107608433 1374.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00697 08 12673051 12677341 Adu08g00697 08 12673051 12677341 ECH