Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00686 ATGCAAAACTACTCGGTGATGCATTGGTCCTCATTACAACAAAGGGGTAAAGAAGTTTTTAATGTGGCCAGACCCATAGTTCCGACCCTTGAGTGCCCTGGACTTTTAGCTCGTCCCGTCTACAGAGTTCAAATAAGCACCATGGCAGTCAAGGAAAATTTGGTGGTGGCAGGTGGTTATCATGGCGAGCTCGTTTGCAAGAATTTGCGGCATCCTGGTGTTGCATTCTGCAGTAAAATAACTCCTGGTAATGCCATAACCAACGCTGTTGATGTTTACCGCCATCCAAGTGGGTCGCTGAGGGTTGTTGCAGCAAATAATGATTCCCAAGTTCAGATGTTCGATGCAGAAAATTTTGCTTCCGTGGGTTGTTTTAAATATGATTGGTCTGTTAATAATACTTCTGTCAGTCCAGATGGCAGGTTGTTGGCTATTCTTGGTGACAGTGCTGAGTGCTTGTTAGCTGATGCTAACTCCGGGAAGGTTATTGGGAGCCTAAAAGGGCACTTGGACTACTCTTTTTCGTCTGCTTGGCACCCAGATGGAAGAATATTGGCTACGGGGAACCAGGACACAACATGCAGGTTATGGGACATAAGGAACCTCTCAGAGTCCGTAGGTGTGCTTAAGGGAAGAATGGGTGCAATAAGAGCCTTAAGGTTCACATCTGATGGGCAGTTCTTGGCCATGGCTGAGCCAGCAGACTTTGTCCATGTATTTGACTCCAAGTCTGGCTATGTGCAAGCTCAAGAGATTGATCTATTTGGTGAAATTGCTGGGATATCCTTTAGCCCGGACACGGAGGCCCTATTTATTGCTATTGCCGACCGTACCTATGGAAGCTTGTTAGAGTTCATCAGAAAACGCGACAATAATTACCTTGCCAATATGTTTTAG 897 0.4582 MQNYSVMHWSSLQQRGKEVFNVARPIVPTLECPGLLARPVYRVQISTMAVKENLVVAGGYHGELVCKNLRHPGVAFCSKITPGNAITNAVDVYRHPSGSLRVVAANNDSQVQMFDAENFASVGCFKYDWSVNNTSVSPDGRLLAILGDSAECLLADANSGKVIGSLKGHLDYSFSSAWHPDGRILATGNQDTTCRLWDIRNLSESVGVLKGRMGAIRALRFTSDGQFLAMAEPADFVHVFDSKSGYVQAQEIDLFGEIAGISFSPDTEALFIAIADRTYGSLLEFIRKRDNNYLANMF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00686 298 SMART WD40_4 202 241 IPR001680 GO:0005515
Adu08g00686 298 SMART WD40_4 118 156 IPR001680 GO:0005515
Adu08g00686 298 SMART WD40_4 159 198 IPR001680 GO:0005515
Adu08g00686 298 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 166 201 - -
Adu08g00686 298 Gene3D - 88 295 IPR015943 GO:0005515
Adu08g00686 298 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 1 297 - -
Adu08g00686 298 ProSitePatterns Trp-Asp (WD) repeats signature. 185 199 IPR019775 -
Adu08g00686 298 Pfam WD domain, G-beta repeat 161 198 IPR001680 GO:0005515
Adu08g00686 298 SUPERFAMILY WD40 repeat-like 39 277 IPR036322 GO:0005515
Adu08g00686 298 PANTHER OS03G0386000 PROTEIN 1 297 - -
Adu08g00686 298 ProSiteProfiles Trp-Asp (WD) repeats profile. 166 201 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00686 Adu-Chr8 12443851 12448588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00686 142 278 Miscellaneous Gene Families AT5G08390 30.657 1.12e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00686 - - gmx:100817036 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00686 08 12443851 12448588 Adu08g00686 08 12443851 12448588 ECH