Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00655 ATGGATGCTCAACCAGGTTTATCTCTCGGTTTGAACGCGCATATCTCATCCCCTGTTTCTTCTCACTCTGCTATGCTCACTGATAACTCTTTCTCGTTCCCCATTCCAAATCCTTCCGTTCCGTGGCAGCAATTACTCGTCGACGAAGACTACAAGCCTCTTGATAAACTCAAACACGAGGATGAAGAAGAAGAAGACGATGATGATGATGATGATGTTGATCAAGAAGAAGAAGAAGATGATGATGAAGAAGAAGAAGAAGGGGGAATCATAGACGAAGAAGAAGCACATGAACAAAAGGAACAGGAGAGGAAGCAGCACCAAACGATTAACTTCATGGGGGGTGGTTCTTTTCCGGTGAAGAGAAGGCACATAGAGGGTTCTGAATCGTACTTCCCTTCAAAGCGTTTCGCCGCGGACTCGAATTCGAATTCAAATTCAAATTCAACAGTCGAGGGGCGCAAAGCTTCGGTGCTGTCATGGGGGAATCAGCCACTTGGAATCGCAGACCCCGAAATCTTCGAGATCATGGAGAAGGAGAAGAAAAGACAGTTCAAAGGAATCGAATTGATCGCTTCGGAGAATTTTGTGTGCAAGGCAGTGATGGAAGCATTGGGAAGCCATTTGACCAATAAGTATTCTGAGGGAATGCCCGGTAACAAGTACTACACTGGGAATCAGCACATTGATCAGCTTGAGTTTCTATGCTGCGAGCGTGCTTTGGTTGCTTTTGATCTTGATCCTAACAAATGGGGTGTGAATGTTCAGCCATATTCCTGCACTTCTGCGAATTTCGCTGTTTACACCGGTCTTTTGCATCCTGGAGATAGAATCATGGGAATGGATTCTGCTTCTGGGGGACACTTGAGTCATGGCTATTACACTATGAGTGGGAAGAAGGTTTCTGCTGCTTCGATTTTCTTCGAGACAATGCCTTACAAGGTGAATCACTTAACTGGGTACATTGATTATGAGAAGCTTGAGGAGAAAGCTATGGACTTTAGGCCAAAGATACTTATTTGTGGAGGGAGTTCTTACCCTCGAGAATGGGATTATGGGAAGTTCAGGATGATTGCTGATAAATGTGGTGCAGTGTTGATGTGTGACATGGCTCATATTAGTGGTCTTGTGGCGGCTAAGGAAGTGGCTAGTCCATTTGATTACTGTGATATTGTTACCTCAACAACCCACAAAAGCCTTCGGGGTCCAAGGGGAGGCATTGTTTTTTACAGAAGAGGGGCGAAACCAAGGAAACCAGGCCATGTTCATTATCATGGAGATGATGTTAATTATGATTTGGAGGAGAAGATAAACTTTGCTTTGTATCCATCGTTACAGGGAGGTCCTCATAATAACCACATCGCTGCTCTTGCCGTGGCTTTGAAACAAGTTGCAACTCCTGAGTACAAAGCATACATGCAGCAGGTGAAGAAAAATGCGCAGGCATTAGCTTCTGCTTTGTTGAAAAGAAAATGCAGATTAGTGACTGATGGAACCGACAATCATCTGTTGCTTTGGGATCTAACTGCACTTGGCTTGAATGACAGAAATTATGAGAAGGTCTGCGAGGCATGTCACATCACTCTAAACAAATGCGCCATTTATGGTTCTACTTCTCCTGGAGGAGTGAGAATTGGTACCCCTGCAATGACATCAAGAGGGTGCGTAGAGGAAGATTTTGAGACCATAGCTGAGTTCCTTTTGAAGGCAGCTCAGATTACCAGCAGCATTGTACAGCGGGAACATGCCAAACCGTTCAAGGATTTCGTCAAGAATCTTCAGATCAACAAAGATATTTCCAATCTCAGAAATCAGGTCGAGGCATTTAGTTCCCGGTTTGCTATGCCAGGATTCGATTTCTGA 1863 0.445 MDAQPGLSLGLNAHISSPVSSHSAMLTDNSFSFPIPNPSVPWQQLLVDEDYKPLDKLKHEDEEEEDDDDDDDVDQEEEEDDDEEEEEGGIIDEEEAHEQKEQERKQHQTINFMGGGSFPVKRRHIEGSESYFPSKRFAADSNSNSNSNSTVEGRKASVLSWGNQPLGIADPEIFEIMEKEKKRQFKGIELIASENFVCKAVMEALGSHLTNKYSEGMPGNKYYTGNQHIDQLEFLCCERALVAFDLDPNKWGVNVQPYSCTSANFAVYTGLLHPGDRIMGMDSASGGHLSHGYYTMSGKKVSAASIFFETMPYKVNHLTGYIDYEKLEEKAMDFRPKILICGGSSYPREWDYGKFRMIADKCGAVLMCDMAHISGLVAAKEVASPFDYCDIVTSTTHKSLRGPRGGIVFYRRGAKPRKPGHVHYHGDDVNYDLEEKINFALYPSLQGGPHNNHIAALAVALKQVATPEYKAYMQQVKKNAQALASALLKRKCRLVTDGTDNHLLLWDLTALGLNDRNYEKVCEACHITLNKCAIYGSTSPGGVRIGTPAMTSRGCVEEDFETIAEFLLKAAQITSSIVQREHAKPFKDFVKNLQINKDISNLRNQVEAFSSRFAMPGFDF 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00655 620 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 7 136 619 - -
Adu08g00655 620 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 136 619 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Adu08g00655 620 MobiDBLite consensus disorder prediction 93 107 - -
Adu08g00655 620 Pfam Serine hydroxymethyltransferase 169 566 IPR039429 -
Adu08g00655 620 CDD SHMT 170 593 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Adu08g00655 620 Gene3D - 195 474 IPR015421 GO:0003824
Adu08g00655 620 SUPERFAMILY PLP-dependent transferases 159 619 IPR015424 -
Adu08g00655 620 MobiDBLite consensus disorder prediction 1 119 - -
Adu08g00655 620 MobiDBLite consensus disorder prediction 60 92 - -
Adu08g00655 620 Gene3D Aspartate Aminotransferase, domain 1 170 616 IPR015422 GO:0003824
Adu08g00655 620 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 390 406 IPR019798 GO:0030170
Adu08g00655 620 MobiDBLite consensus disorder prediction 10 39 - -
Adu08g00655 620 Hamap Serine hydroxymethyltransferase [glyA]. 165 617 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00655 Adu-Chr8 11746350 11749704 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00655 K00600 - gmx:100776419 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00655 08 11746350 11749704 Adu08g00655 08 11746350 11749704 ECH