Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00648 ATGGAACACGCCGACGTTTTCCTTGGCTTACACGACTTCCTCGAGCGGATGCGCCAACCCTCCGCCGCCGATTTCGTCAAAGCCATCAAGAGTTTCATAGTGTCGTTTTCGAACAATGCACCTGATCCTGAGAGGGACGGTGGCGCAGTGCAAGAGTTCTTTGCCAACATGGAAGCTGCTTTTAGGGCTCATCCGCTTTGGGCTGGTTGCTCTGATGAAGAGCTCGAAAGTGCTGGTGAAGGGCTTGAGAAGTATGTCATGACAAAGTTGTTTGCCCGTGTATTTGCTTCTCTTCCAGAGGATGTAAAACTTGATGACCAACTTTCTGAAAAGATGGCTTTAGTTCAACAGTTTATCAAGCCAGAAAATTTGGATATCAAGCCAGCCTTTGAGAATGAAACATCGTGGTTGCTTGCACAAAAAGAATTGCAGAAAATCAACATGTACAAGGCACCCAGAGACAAACTTGTCTGTATACTAAATTGCTGCAAGGTTATTGGTAACTTGCTGCTTAATGCTTCTCTAGCATCCAAAGATAGTCCTCCAGGAGCTGATGATTTTCTTCCTGTGCTAATTTATGTTACCATAAAGGCGAATCCTCCACAACTGCACTCAAATCTACTGTACATACAAAGATTTAGACGCCAATCACGATTGACTGGGGAAGCAGCATATTACTTTACAAATATGCTCTCTGTTGAGTCCTTCATCTCAAACATTGATGCAAAAGCCCTTTCAATGGATGAAAGTGAGTTTGAGAGAAACATGGAATTCGCCCGCACCCTTCTGTCGGGGCTTTCAGCTAGTACGCAAGATTCCGGTACAAATTATCAAAATCATGGAAACCAGTCAAGATCAGAAGCCACCAAGCACCAAAAAAGAGCTTCAAATGATAATAACGATGCCTTATTACAAACTGCTCCATCTCTTCCAAAATACGAAAATAAGAATATGACCCTTGCAGATGAGTCATTAATCACAAAGGTTCCATCCCTCTCAGAGTTGGAGAACAAAGGGGCAAATATGCTTTTAAAGGAGGATAAGTTGAATGAAGTTTTCAGGGAGTACCCATATTTGTTTGCCAGTGTAGGTGACCTAACAGTAGGTGATGTTGAAGACCTACTGAACAATTATAAACAACTTGTTTTCAAGTATGTTTCTCTCTCCAAGGGGTTAGGAGTCTCCACTAAATCTCATCCTTCATCATCTAATCCACCAAACAATGTTCAAGTCCATGATGAAACCACAGTAGAGTCAGCATCAGATGGTGGACATGTAGATGCCCACGAGAAATCAGAAGATTCTAATGATTCAAGTAAAAAAGAGGATAGTTCAGAAAAAGTTTCACCAGATGAGGAGAAAACAGTTGAATCTGTTGTGCCACAGGATGAAACAGTTGCACCAGAAGGTGGGACCAGTGTAGAATCCTCTGATTAG 1437 0.4231 MEHADVFLGLHDFLERMRQPSAADFVKAIKSFIVSFSNNAPDPERDGGAVQEFFANMEAAFRAHPLWAGCSDEELESAGEGLEKYVMTKLFARVFASLPEDVKLDDQLSEKMALVQQFIKPENLDIKPAFENETSWLLAQKELQKINMYKAPRDKLVCILNCCKVIGNLLLNASLASKDSPPGADDFLPVLIYVTIKANPPQLHSNLLYIQRFRRQSRLTGEAAYYFTNMLSVESFISNIDAKALSMDESEFERNMEFARTLLSGLSASTQDSGTNYQNHGNQSRSEATKHQKRASNDNNDALLQTAPSLPKYENKNMTLADESLITKVPSLSELENKGANMLLKEDKLNEVFREYPYLFASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLGVSTKSHPSSSNPPNNVQVHDETTVESASDGGHVDAHEKSEDSNDSSKKEDSSEKVSPDEEKTVESVVPQDETVAPEGGTSVESSD 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00648 478 MobiDBLite consensus disorder prediction 269 285 - -
Adu08g00648 478 Pfam Domain of unknown function (DUF5601) 27 91 IPR041545 -
Adu08g00648 478 PANTHER RAB GDP/GTP EXCHANGE FACTOR 1 411 IPR045046 GO:0005085|GO:0016192
Adu08g00648 478 MobiDBLite consensus disorder prediction 269 309 - -
Adu08g00648 478 Pfam Vacuolar sorting protein 9 (VPS9) domain 138 241 IPR003123 -
Adu08g00648 478 Gene3D VPS9 domain 99 264 IPR037191 -
Adu08g00648 478 MobiDBLite consensus disorder prediction 393 478 - -
Adu08g00648 478 MobiDBLite consensus disorder prediction 418 459 - -
Adu08g00648 478 ProSiteProfiles VPS9 domain profile. 102 246 IPR003123 -
Adu08g00648 478 SUPERFAMILY VPS9 domain 11 257 IPR037191 -
Adu08g00648 478 SMART vps9_2 135 255 IPR003123 -
Adu08g00648 478 MobiDBLite consensus disorder prediction 393 417 - -
Adu08g00648 478 PANTHER BNAC09G47180D PROTEIN 1 411 - -
Adu08g00648 478 Gene3D - 17 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00648 Adu-Chr8 11671076 11675489 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00648 K20131 - gmx:100810958 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00648 08 11671076 11675489 Adu08g00648 08 11671076 11675489 ECH