LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g00637	ATGCATCCTTTTTGCTGCGTATCCGCTGTCTCCGACCAGTCTTCTCCGGTAAAACCTACGCCCGCGGCTCACTTCGCGGACTTCACCATGCCTCCTCTCCCCTCCGCTGCCGTCAGATCCGATTCAGCCCCACGCCACAGTCATAGCCACAACCACGGGCGGGGGAGCCAGCAACAACAGCAGCGGGAGCAACCGCCGCCGCCGGTGGTGGTTGATGTGAAGATCAACGACCTCGTCGGAAATGGAATCTCGGGAATACTGTACAAGTGGGTGAATTATGGCAAAGGATGGAGGCCACGGTGGTTCGTGCTCCAAGACGGCGTTCTCTCCTATTATAAGATTCACGGTCCTGATAAGATCGTCGTGAATCCCGAGACCGAGAAGGGCTCCAAGGTCATCGGCGAGGAATCCATGCGCAGGATCTCTCGCAACCGCAATTCCCAATCCCAACACCACCGTCGAAAGCCCTTCGGTGAAATCCACCTCAAGGTTTCGACGATTCGAGAGAGCAAATCCGATGATAAGAGGTTTTCGGTGTTCACGGGAACGAAGAGGATGCACCTGAGGGCAGAGACGAGAGAGGATCGGACGGCGTGGATGGAGGCGCTGCAAGCGGTGAAGGACATGTTCCCAAGGATCTCGAACAGCGAGCTGATGGCGCCGGTGGACAATGTGAGCGTCTCGACGGAGAAGCTGAGGCAGAGGCTTCTAGAAGAACGGGTGAGTGAGGCTGCCATTCAGGATAGCGAGCAGATCATGAGGACAGAGTTTGCGGCGCTGCAGAACCAGCTTAAGCTCCTCAAGCAGAAGCAGTCAATGCTCATTGACACATTGCGCCACTTAGAGACAGAAAAGGTCGATCTGGAAAATACAGTTGTTGATGAGAGCCAAAGACAGTGGAATGATCAAGAGACTTCCTCCACATTAAGGCAGGAAAAATCTAGTGGGCATCGTCGCCACCGCTGGGAGCTCGCCGGGACCCCATCGTCGTTGTTGCAACCGCCTAGAGTACCCACTGAACGCGATTTTCTATCGTCCAGTTCTTTCAAAAGTAATGGGTCTGATTATAGAGTATCATCTTTCTCTTCTGATGATGATGGGTTCTATGCATTCGAATCGGAGGATGATGTAGATCCAGCCATTAGATCTGTTGGAAGCAATTACCCTCATATTAAGCGGCGTAAGAAATTGCCTGATCCTGTAGAGAAAGAGAAAGGTGTGAGTCTCTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACTAAAGTTTGCCTCCCTGTTTATTTTAATGAGCCACTCTCCTCCCTGCAAAAATGTTTTGAAGAAATGGAATATTCACATCTGCTGGACCAAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGATTCTCTGTGTTGCTGCTTTTGCTGTATCTGGTTATGCTTCAACTGATGGAAGAGTTTGCAAACCATTTAATCCATTACTCGGGGAAACATATGAAGCTAATTTTCCAGACAAAGGCCTTCGATTTTTCTCAGAAAAGGTCAGTCATCACCCAATGATAGTTGCGTGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCAGATCAATTCAGCTTGACCCTGTCGGTACTTTGACCTTGGAATTTGAGGATGGGGAGGTTTTCCAGTGGAGCAAGGTTACTACATCAATATACAATCTTATATTAGGAAAGCTGTACTGTGATCACTATGGAACAATGCGTATACAGGGAAACCAAGAGTATTCATGTAAGCTGAAATTCAAGGAACAGTCTATAATTGATCGAAATCCTCACCAGGTCCATGGTATCGTTCAAGATAGGAATGGGAAAACAGTATCTACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTTAACGGAGACTACAGTGCAAAGGGAAAAGCTCACGAATCCTTATCAGAAGCCCGACTACTCTGGAAGAGAAGCAAGCCTCCCAAATTTCCCACTAGATATAACTTCACTCGTTTTGCCATCACATTAAATGAACTTACCCCTGGGTTGAAGGAAAAGTTGCCACCGACTGATTCCAGGTTAAGACCAGACCAAAGGTATCTGGAAAACGGGGAATATGAGATGGCAAATTCAGAAAAGTTACGGCTAGAGCAGAGGCAGCGACAGGCTCGGAAGATGCAAGAGAGGGGTTGGAAACCGCGGTGGTTTGCCAAGGATAAAGCAACCGGCACATACCGATACCTAGGAGGATATTGGGAGTCCCGAGAAGAAGGCACCTGGGACTCCTGTCCTGACATCTTTGGCCAAATTCCTTCAGACCATCTTTCCGACGAAGGTCAAACTGCATCTTAG	2373	0.4838	MHPFCCVSAVSDQSSPVKPTPAAHFADFTMPPLPSAAVRSDSAPRHSHSHNHGRGSQQQQQREQPPPPVVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSKVIGEESMRRISRNRNSQSQHHRRKPFGEIHLKVSTIRESKSDDKRFSVFTGTKRMHLRAETREDRTAWMEALQAVKDMFPRISNSELMAPVDNVSVSTEKLRQRLLEERVSEAAIQDSEQIMRTEFAALQNQLKLLKQKQSMLIDTLRHLETEKVDLENTVVDESQRQWNDQETSSTLRQEKSSGHRRHRWELAGTPSSLLQPPRVPTERDFLSSSSFKSNGSDYRVSSFSSDDDGFYAFESEDDVDPAIRSVGSNYPHIKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSHLLDQAYEWGRRGNSLMRILCVAAFAVSGYASTDGRVCKPFNPLLGETYEANFPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFEDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVSTLFGKWDESMHYVNGDYSAKGKAHESLSEARLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQERGWKPRWFAKDKATGTYRYLGGYWESREEGTWDSCPDIFGQIPSDHLSDEGQTAS	790

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g00637	790	Coils	Coil	250	270	-	-
	Adu08g00637	790	SMART	PH_update	81	210	IPR001849	-
	Adu08g00637	790	Coils	Coil	278	298	-	-
	Adu08g00637	790	Pfam	Oxysterol-binding protein	408	763	IPR000648	GO:0008289
	Adu08g00637	790	MobiDBLite	consensus disorder prediction	297	357	-	-
	Adu08g00637	790	Gene3D	-	81	210	IPR011993	-
	Adu08g00637	790	MobiDBLite	consensus disorder prediction	340	357	-	-
	Adu08g00637	790	Pfam	Pleckstrin homology domain	88	204	-	-
	Adu08g00637	790	Coils	Coil	713	736	-	-
	Adu08g00637	790	MobiDBLite	consensus disorder prediction	770	790	-	-
	Adu08g00637	790	Gene3D	-	705	768	-	-
	Adu08g00637	790	CDD	PH_ORP_plant	83	215	-	-
	Adu08g00637	790	SUPERFAMILY	Oxysterol-binding protein-like	403	782	IPR037239	-
	Adu08g00637	790	MobiDBLite	consensus disorder prediction	34	68	-	-
	Adu08g00637	790	PANTHER	OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C	2	781	-	-
	Adu08g00637	790	Gene3D	-	494	668	-	-
	Adu08g00637	790	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	2	781	IPR000648	GO:0008289
	Adu08g00637	790	ProSiteProfiles	PH domain profile.	80	208	IPR001849	-
	Adu08g00637	790	SUPERFAMILY	PH domain-like	83	208	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g00637	Adu-Chr8	11442692	11447733	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g00637	K20456		-	gmx:100137077	1327.77

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu08g00637	08	11442692	11447733	Adu08g00637	08	11442692	11447733	ECH